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    <title>Baarends, W.M.</title>
    <link>http://repub.eur.nl/res/aut/1002/</link>
    <description>List of Publications</description>
    <language>en</language>
    <image>
      <url>http://repub.eur.nl/static-eur/img/logo.png</url>
      <title>RePub, Erasmus University Rotterdam</title>
      <link>http://repub.eur.nl</link>
    </image>
    <item>
      <title>The X and y chromosome in meiosis: How and why they keep silent (Article)</title>
      <link>http://repub.eur.nl/res/pub/34144/</link>
      <pubDate>2011-11-01T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>Human RAD18 interacts with ubiquitylated chromatin components and facilitates RAD9 recruitment to DNA double strand breaks (Article)</title>
      <link>http://repub.eur.nl/res/pub/31143/</link>
      <pubDate>2011-08-22T00:00:00Z</pubDate>
      <description>RAD18 is an ubiquitin ligase involved in replicative damage bypass and DNA double-strand break (DSB) repair processes. We found that RPA is required for the dynamic pattern of RAD18 localization during the cell cycle, and for accumulation of RAD18 at sites of γ-irradiation-induced DNA damage. In addition, RAD18 colocalizes with chromatin-associated conjugated ubiquitin and ubiquitylated H2A throughout the cell cycle and following irradiation. This localization pattern depends on the presence of an intact, ubiquitin-binding Zinc finger domain. Using a biochemical approach, we show that RAD18 directly binds to ubiquitylated H2A and several other unknown ubiquitylated chromatin components. This interaction also depends on the RAD18 Zinc finger, and increases upon the induction of DSBs by γ-irradiation. Intriguingly, RAD18 does not always colocalize with regions that show enhanced H2A ubiquitylation. In human female primary fibroblasts, where one of the two X chromosomes is inactivated to equalize X-chromosomal gene expression between male (XY) and female (XX) cells, this inactive X is enriched for ubiquitylated H2A, but only rarely accumulates RAD18. This indicates that the binding of RAD18 to ubiquitylated H2A is context-dependent. Regarding the functional relevance of RAD18 localization at DSBs, we found that RAD18 is required for recruitment of RAD9, one of the components of the 9-1-1 checkpoint complex, to these sites. Recruitment of RAD9 requires the functions of the RING and Zinc finger domains of RAD18. Together, our data indicate that association of RAD18 with DSBs through ubiquitylated H2A and other ubiquitylated chromatin components allows recruitment of RAD9, which may function directly in DSB repair, independent of downstream activation of the checkpoint kinases CHK1 and CHK2. </description>
    </item> <item>
      <title>Meiotic functions of RAD18 (Article)</title>
      <link>http://repub.eur.nl/res/pub/31231/</link>
      <pubDate>2011-08-15T00:00:00Z</pubDate>
      <description>RAD18 is an ubiquitin ligase that is involved in replication damage bypass and DNA double-strand break (DSB) repair processes in mitotic cells. Here, we investigated the testicular phenotype of Rad18-knockdown mice to determine the function of RAD18 in meiosis, and in particular, in the repair of meiotic DSBs induced by the meiosis-specific topoisomerase-like enzyme SPO11. We found that RAD18 is recruited to a specific subfraction of persistent meiotic DSBs. In addition, RAD18 is recruited to the chromatin of the XY chromosome pair, which forms the transcriptionally silent XY body. At the XY body, RAD18 mediates the chromatin association of its interaction partners, the ubiquitin-conjugating enzymes HR6A and HR6B. Moreover, RAD18 was found to regulate the level of dimethylation of histone H3 at Lys4 and maintain meiotic sex chromosome inactivation, in a manner similar to that previously observed for HR6B. Finally, we show that RAD18 and HR6B have a role in the efficient repair of a small subset of meiotic DSBs. </description>
    </item> <item>
      <title>Evaluating the relationship between spermatogenic silencing of the X chromosome and evolution of the Y chromosome in chimpanzee and human (Article)</title>
      <link>http://repub.eur.nl/res/pub/28727/</link>
      <pubDate>2010-12-01T00:00:00Z</pubDate>
      <description>Chimpanzees and humans are genetically very similar, with the striking exception of their Y chromosomes, which have diverged tremendously. The male-specific region (MSY), representing the greater part of the Y chromosome, is inherited from father to son in a clonal fashion, with natural selection acting on the MSY as a unit. Positive selection might involve the performance of the MSY in spermatogenesis. Chimpanzees have a highly polygamous mating behavior, so that sperm competition is thought to provide a strong selective force acting on the Y chromosome in the chimpanzee lineage. In consequence of evolution of the heterologous sex chromosomes in mammals, meiotic sex chromosome inactivation (MSCI) results in a transcriptionally silenced XY body in male meiotic prophase, and subsequently also in postmeiotic repression of the sex chromosomes in haploid spermatids. This has evolved to a situation where MSCI has become a prerequisite for spermatogenesis. Here, by analysis of microarray testicular expression data representing a small number of male chimpanzees and men, we obtained information indicating that meiotic and postmeiotic X chromosome silencing might be more effective in chimpanzee than in human spermatogenesis. From this, we suggest that the remarkable reorganization of the chimpanzee Y chromosome, compared to the human Y chromosome, might have an impact on its meiotic interactions with the X chromosome and thereby on X chromosome silencing in spermatogenesis. Further studies will be required to address comparative functional aspects of MSCI in chimpanzee, human, and other placental mammals. </description>
    </item> <item>
      <title>The ubiquitin-conjugating enzyme HR6B is required for maintenance of X chromosome silencing in mouse spermatocytes and spermatids (Article)</title>
      <link>http://repub.eur.nl/res/pub/28429/</link>
      <pubDate>2010-06-10T00:00:00Z</pubDate>
      <description>Background: The ubiquitin-conjugating enzyme HR6B is required for spermatogenesis in mouse. Loss of HR6B results in aberrant histone modification patterns on the trancriptionally silenced X and Y chromosomes (XY body) and on centromeric chromatin in meiotic prophase. We studied the relationship between these chromatin modifications and their effects on global gene expression patterns, in spermatocytes and spermatids.Results: HR6B is enriched on the XY body and on centromeric regions in pachytene spermatocytes. Global gene expression analyses revealed that spermatid-specific single- and multicopy X-linked genes are prematurely expressed in Hr6b knockout spermatocytes. Very few other differences in gene expression were observed in these cells, except for upregulation of major satellite repeat transcription. In contrast, in Hr6b knockout spermatids, 7298 genes were differentially expressed; 65% of these genes was downregulated, but we observed a global upregulation of gene transcription from the X chromosome. In wild type spermatids, approximately 20% of the single-copy X-linked genes reach an average expression level that is similar to the average expression from autosomes.Conclusions: Spermatids maintain an enrichment of repressive chromatin marks on the X chromosome, originating from meiotic prophase, but this does not interfere with transcription of the single-copy X-linked genes that are reactivated or specifically activated in spermatids. HR6B represses major satellite repeat transcription in spermatocytes, and functions in the maintenance of X chromosome silencing in spermatocytes and spermatids. It is discussed that these functions involve modification of chromatin structure, possibly including H2B ubiquitylation. </description>
    </item> <item>
      <title>Meiotic silencing and fragmentation of the male germline restricted chromosome in zebra finch (Article)</title>
      <link>http://repub.eur.nl/res/pub/18552/</link>
      <pubDate>2010-06-01T00:00:00Z</pubDate>
      <description>During male meiotic prophase in mammals, X and Y are in a largely unsynapsed configuration, which is thought to trigger meiotic sex chromosome inactivation (MSCI). In avian species, females are ZW, and males ZZ. Although Z and W in chicken oocytes show complete, largely heterologous synapsis, they too undergo MSCI, albeit only transiently. The W chromosome is already inactive in early meiotic prophase, and inactive chromatin marks may spread on to the Z upon synapsis. Mammalian MSCI is considered as a specialised form of the general meiotic silencing mechanism, named meiotic silencing of unsynapsed chromatin (MSUC). Herein, we studied the avian form of MSUC, by analysing the behaviour of the peculiar germline restricted chromosome (GRC) that is present as a single copy in zebra finch spermatocytes. In the female germline, this chromosome is present in two copies, which normally synapse and recombine. In contrast, during male meiosis, the single GRC is always eliminated. We found that the GRC in the male germline is silenced from early leptotene onwards, similar to the W chromosome in avian oocytes. The GRC remains largely unsynapsed throughout meiotic prophase I, although patches of SYCP1 staining indicate that part of the GRC may self-synapse. In addition, the GRC is largely devoid of meiotic double strand breaks. We observed a lack of the inner centromere protein INCENP on the GRC and elimination of the GRC following metaphase I. Subsequently, the GRC forms a micronucleus in which the DNA is fragmented. We conclude that in contrast to MSUC in mammals, meiotic silencing of this single chromosome in the avian germline occurs prior to, and independent of DNA double strand breaks and chromosome pairing, hence we have named this phenomenon meiotic silencing prior to synapsis (MSPS).</description>
    </item> <item>
      <title>DNA double strand break repair, chromosome synapsis and transcriptional silencing in meiosis (Article)</title>
      <link>http://repub.eur.nl/res/pub/20243/</link>
      <pubDate>2010-05-01T00:00:00Z</pubDate>
      <description>Chromosome pairing and synapsis during meiotic prophase requires the formation and repair of DNA double-strand breaks (DSBs) by the topoisomerase-like enzyme SPO11. Chromosomes, or chromosomal regions, that lack a pairing partner, such as the largely heterologous X and Y chromosomes, show delayed meiotic DSB repair and are transcriptionally silenced. Herein, we review meiosis-specific aspects of DSB repair in relation to homology recognition and meiotic silencing of heterologous regions. We propose a dynamic interplay between progression of synapsis and persistent meiotic DSBs. Signaling from these persistent breaks could inhibit heterologous synapsis and stimulate meiotic silencing of the X and Y chromosomes.</description>
    </item> <item>
      <title>DNA double strand break repair, chromosome synapsis and transcriptional silencing in meiosis (Article)</title>
      <link>http://repub.eur.nl/res/pub/20735/</link>
      <pubDate>2010-05-01T00:00:00Z</pubDate>
      <description>Chromosome pairing and synapsis during meiotic prophase requires the formation and repair of DNA double-strand breaks (DSBs) by the topoisomerase-like enzyme SPO11. Chromosomes, or chromosomal regions, that lack a pairing partner, such as the largely heterologous X and Y chromosomes, show delayed meiotic DSB repair and are transcriptionally silenced. Herein, we review meiosis-specific aspects of DSB repair in relation to homology recognition and meiotic silencing of heterologous regions. We propose a dynamic interplay between progression of synapsis and persistent meiotic DSBs. Signaling from these persistent breaks could inhibit heterologous synapsis and stimulate meiotic silencing of the X and Y chromosomes.</description>
    </item> <item>
      <title>Functional transformation of the chromatoid body in mouse spermatids requires testis-specific serine/threonine kinases (Article)</title>
      <link>http://repub.eur.nl/res/pub/19524/</link>
      <pubDate>2010-02-01T00:00:00Z</pubDate>
      <description>The cytoplasmic chromatoid body (CB) organizes mRNA metabolism and small regulatory RNA pathways, in relation to haploid gene expression, in mammalian round spermatids. However, little is known about functions and fate of the CB at later steps of spermatogenesis, when elongating spermatids undergo chromatin compaction and transcriptional silencing. In mouse elongating spermatids, we detected accumulation of the testis-specific serine/threonine kinases TSSK1 and TSSK2, and the substrate TSKS, in a ring-shaped structure around the base of the flagellum and in a cytoplasmic satellite, both corresponding to structures described to originate from the CB. At later steps of spermatid differentiation, the ring is found at the caudal end of the newly formed mitochondrial sheath. Targeted deletion of the tandemly arranged genes Tssk1 and Tssk2 in mouse resulted in male infertility, with loss of the CB-derived ring structure, and with elongating spermatids possessing a collapsed mitochondrial sheath. These results reveal TSSK1- and TSSK2-dependent functions of a transformed CB in post-meiotic cytodifferentiation of spermatids.</description>
    </item> <item>
      <title>Sisters dancing in meiosis (Article)</title>
      <link>http://repub.eur.nl/res/pub/28495/</link>
      <pubDate>2010-02-01T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>Female meiotic sex chromosome inactivation in chicken (Article)</title>
      <link>http://repub.eur.nl/res/pub/24974/</link>
      <pubDate>2009-05-01T00:00:00Z</pubDate>
      <description>During meiotic prophase in male mammals, the heterologous X and Y chromosomes remain largely unsynapsed, and meiotic sex chromosome inactivation (MSCI) leads to formation of the transcriptionally silenced XY body. In birds, the heterogametic sex is female, carrying Z and W chromosomes (ZW), whereas males have the homogametic ZZ constitution. During chicken oogenesis, the heterologous ZW pair reaches a state of complete heterologous synapsis, and this might enable maintenance of transcription of Z- and W chromosomal genes during meiotic prophase. Herein, we show that the ZW pair is transiently silenced, from early pachytene to early diplotene using immunocytochemistry and gene expression analyses. We propose that ZW inactivation is most likely achieved via spreading of heterochromatin from the W on the Z chromosome. Also, persistent meiotic DNA double-strand breaks (DSBs) may contribute to silencing of Z. Surprisingly, γH2AX, a marker of DSBs, and also the earliest histone modification that is associated with XY body formation in mammalian and marsupial spermatocytes, does not cover the ZW during the synapsed stage. However, when the ZW pair starts to desynapse, a second wave of γH2AX accumulates on the unsynapsed regions of Z, which also show a reappearance of the DSB repair protein RAD51. This indicates that repair of meiotic DSBs on the heterologous part of Z is postponed until late pachytene/diplotene, possibly to avoid recombination with regions on the heterologously synapsed W chromosome. Two days after entering diplotene, the Z looses γH2AX and shows reactivation. This is the first report of meiotic sex chromosome inactivation in a species with female heterogamety, providing evidence that this mechanism is not specific to spermatogenesis. It also indicates the presence of an evolutionary force that drives meiotic sex chromosome inactivation independent of the final achievement of synapsis. </description>
    </item> <item>
      <title>Dynamic localization of human RAD18 during the cell cycle and a functional connection with DNA double-strand break repair (Article)</title>
      <link>http://repub.eur.nl/res/pub/24318/</link>
      <pubDate>2009-02-01T00:00:00Z</pubDate>
      <description>The ubiquitin ligase RAD18 is involved in different DNA repair processes. Here, we show that in G1 phase, human RAD18 accumulates in a few relatively large spontaneous foci that contain proteins involved in double-strand break (DSB) repair. These foci persist until cells enter S phase, when numerous small foci appear. At these sites, only 20% of RAD18 colocalizes with PCNA, a known RAD18 substrate. In late G2 phase, RAD18 relocates to nucleoli. After UVC irradiation, PCNA accumulates at the damaged site, followed by RAD18, independent of the cell cycle phase. After induction of DSBs, using low-power multi-photon laser, RAD18 accumulated at the DSB sites, but no PCNA accumulation was observed. Our data show that RAD18 accumulates on DSBs independent of the cell cycle phase. DSBs marked by RAD18 and RAD51 are also positive for RPA in G1 phase, and these DSBs persist until S phase. In addition, we show that DSBs generated in G2 phase are not all repaired, and are observed again in the next G1 phase. We conclude that repair of induced and spontaneous DSBs that accumulate RAD18 and RAD51 in G1 phase cells is delayed until S phase. </description>
    </item> <item>
      <title>Our genome in the male germ line: Is it safe? (Article)</title>
      <link>http://repub.eur.nl/res/pub/18247/</link>
      <pubDate>2009-01-01T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>Increased frequency of asynapsis and associated meiotic silencing of heterologous chromatin in the presence of irradiation-induced extra DNA double strand breaks (Article)</title>
      <link>http://repub.eur.nl/res/pub/29081/</link>
      <pubDate>2008-05-01T00:00:00Z</pubDate>
      <description>In meiotic prophase of male placental mammals, the heterologous X and Y chromosomes remain largely unsynapsed, which activates meiotic sex chromosome inactivation (MSCI), leading to formation of the transcriptionally silenced XY body. MSCI is most likely related to meiotic silencing of unsynapsed chromatin (MSUC), a mechanism that can silence autosomal unsynapsed chromatin. However, heterologous synapsis and escape from silencing also occur. In mammalian species, formation of DNA double strand breaks (DSBs) during leptotene precedes meiotic chromosome pairing. These DSBs are essential to achieve full synapsis of homologous chromosomes. We generated 25% extra meiotic DSBs by whole body irradiation of mice. This leads to a significant increase in meiotic recombination frequency. In mice carrying translocation chromosomes with synaptic problems, we observed an approximately 35% increase in asynapsis and MSUC of the nonhomologous region in the smallest chromosome pair following irradiation. However, the same nonhomologous region in the largest chromosome pair, shows complete synapsis and escape from MSUC in almost 100% of the nuclei, irrespective of exposure to irradiation. We propose that prevention of synapsis and associated activation of MSUC is linked to the presence of unrepaired meiotic DSBs in the nonhomologous region. Also, spreading of synaptonemal complex formation from regions of homology may act as an opposing force, and drive heterologous synapsis. </description>
    </item> <item>
      <title>Increased phosphorylation and dimethylation of XY body histones in the Hr6b-knockout mouse is associated with derepression of the X chromosome (Article)</title>
      <link>http://repub.eur.nl/res/pub/31785/</link>
      <pubDate>2007-06-01T00:00:00Z</pubDate>
      <description>Mono-ubiquitylated H2A marks the transcriptionally silenced XY body during male meiotic prophase. Concomitant with H2AK119ub1, the ubiquitin-conjugating enzyme HR6B is also enriched on the XY body. We analyzed H2A and H2B ubiquitylation in Hr6b-knockout mouse spermatocytes, but no global changes were detected. Next, we analyzed phosphorylation of the threonine residues T120 and T119 that are adjacent to the K119 and K120 target sites for ubiquitylation in H2A and H2B, respectively. In wild-type cells, H2AT120phand H2BT119phmark meiotically impaired and silenced chromatin, including the XY body. In Hr6b-knockout spermatocytes, the H2BT119phsignal was unchanged, but H2AT120phwas enhanced from late pachytene until metaphase I. Furthermore, we found increased H3K4dimethylation on the X and Y chromosomes of diplotene Hr6b-knockout spermatocytes, persisting into postmeiotic round spermatids. In these cells, the X and Y chromosomes maintained an unchanged H3K9m2level, even when this modification was lost from centromeric heterochromatin. Analysis of gene expression showed derepression of X chromosome genes in postmeiotic Hr6b-knockout spermatids. We conclude that HR6B exerts control over different histone modifications in spermatocytes and spermatids, and that this function contributes to the postmeiotic maintenance of X chromosome silencing.</description>
    </item> <item>
      <title>Transition from a nucleosome-based to a protamine-based chromatin configuration during spermiogenesis in Drosophila (Article)</title>
      <link>http://repub.eur.nl/res/pub/35460/</link>
      <pubDate>2007-05-01T00:00:00Z</pubDate>
      <description>In higher organisms, the chromatin of sperm is organised a highly condensed protamine-based structure. In premeiotic stages and shortly after meiosis, histones carry multiple modifications. Here, we focus on post-meiotic stages and show that also after meiosis, histone H3 shows a high overall methylation of K9 and K27 and we hypothesise that these modifications ensure maintenance of transcriptional silencing in the haploid genome. Furthermore, we show that histones are lost during the early canoe stage and that just before this stage, hyperacetylation of histone H4 and mono-ubiquitylation of histone H2A occurs. We believe that these histone modifications within the histone-based chromatin architecture may lead to better access of enzymes and chromatin remodellers. This notion is supported by the presence of the architectural protein CTCF, numerous DNA breaks, SUMO, UbcD6 and high content of ubiquitin, as well as testes-specific nuclear proteasomes at this time. Moreover, we report the first transition protein-like chromosomal protein, Tpl94D, to be found in Drosophila. We propose that Tpl94D- an EMG box protein - and the numerous DNA breaks facilitate chromatin unwinding as a prelude to protamine and Mst77F deposition. Finally, we show that histone modifications and removal are independent of protamine synthesis.</description>
    </item> <item>
      <title>Differential contributions of mammalian Rad54 paralogs to recombination, DNA damage repair, and meiosis. (Article)</title>
      <link>http://repub.eur.nl/res/pub/13976/</link>
      <pubDate>2006-02-01T00:00:00Z</pubDate>
      <description>Homologous recombination is a versatile DNA damage repair pathway requiring Rad51 and Rad54. Here we show that a mammalian Rad54 paralog, Rad54B, displays physical and functional interactions with Rad51 and DNA that are similar to those of Rad54. While ablation of Rad54 in mouse embryonic stem (ES) cells leads to a mild reduction in homologous recombination efficiency, the absence of Rad54B has little effect. However, the absence of both Rad54 and Rad54B dramatically reduces homologous recombination efficiency. Furthermore, we show that Rad54B protects ES cells from ionizing radiation and the interstrand DNA cross-linking agent mitomycin C. Interestingly, at the ES cell level the paralogs do not display an additive or synergic interaction with respect to mitomycin C sensitivity, yet animals lacking both Rad54 and Rad54B are dramatically sensitized to mitomycin C compared to either single mutant. This suggests that the paralogs possibly function in a tissue-specific manner. Finally, we show that Rad54, but not Rad54B, is needed for a normal distribution of Rad51 on meiotic chromosomes. Thus, even though the paralogs have similar biochemical properties, genetic analysis in mice uncovered their nonoverlapping roles.</description>
    </item> <item>
      <title>Silencing of unpaired chromatin and histone H2A ubiquitination in mammalian meiosis. (Article)</title>
      <link>http://repub.eur.nl/res/pub/13646/</link>
      <pubDate>2005-02-01T00:00:00Z</pubDate>
      <description>During meiotic prophase in male mammals, the X and Y chromosomes are incorporated in the XY body. This heterochromatic body is transcriptionally silenced and marked by increased ubiquitination of histone H2A. This led us to investigate the relationship between histone H2A ubiquitination and chromatin silencing in more detail. First, we found that ubiquitinated H2A also marks the silenced X chromosome of the Barr body in female somatic cells. Next, we studied a possible relationship between H2A ubiquitination, chromatin silencing, and unpaired chromatin in meiotic prophase. The mouse models used carry an unpaired autosomal region in male meiosis or unpaired X and Y chromosomes in female meiosis. We show that ubiquitinated histone H2A is associated with transcriptional silencing of large chromatin regions. This silencing in mammalian meiotic prophase cells concerns unpaired chromatin regions and resembles a phenomenon described for the fungus Neurospora crassa and named meiotic silencing by unpaired DNA.</description>
    </item> <item>
      <title>Basic helix-loop-helix transcription factor Tcfl5 interacts with the Calmegin gene promoter in mouse spermatogenesis. (Article)</title>
      <link>http://repub.eur.nl/res/pub/13595/</link>
      <pubDate>2004-12-01T00:00:00Z</pubDate>
      <description>In mouse spermatogenesis, differentiating germ line cells initiate
      expression of specific genes at subsequent developmental steps. The
      Calmegin (Clgn) gene is first expressed in meiotic prophase, in primary
      spermatocytes, and encodes a protein that acts as a chaperone. To identify
      testis-specific transcription factors that control expression of the Clgn
      gene in spermatogenesis, we performed a yeast one-hybrid screening with a
      Clgn promoter sequence as bait DNA. This screening resulted in the
      identification of mouse Tcfl5 as a candidate Clgn promoter-binding
      protein. Tcfl5 is a member of the basic helix-loop-helix (bHLH) family of
      transcription factors, and mouse Tcfl5 shows 83% amino acid sequence
      identity with human TCFL5. Gel-shift and yeast one-hybrid experiments
      showed that Tcfl5 interacts with a non-canonical CACGCG site that is
      present in the Clgn promoter. By using northern blot, RT-PCR and in situ
      hybridization, mouse Tcfl5 mRNA was detected only in testis, with the
      highest expression level in primary spermatocytes and round spermatids.
      The highest level of Tcfl5 protein was found in primary spermatocytes at
      the diplotene stage of meiotic prophase, where the protein colocalizes
      with transcriptionally active chromatin.</description>
    </item> <item>
      <title>The ubiquitin-conjugating DNA repair enzyme HR6A is a maternal factor essential for early embryonic development in mice. (Article)</title>
      <link>http://repub.eur.nl/res/pub/13407/</link>
      <pubDate>2004-06-01T00:00:00Z</pubDate>
      <description>The Saccharomyces cerevisiae RAD6 protein is required for a surprising diversity of cellular processes, including sporulation and replicational damage bypass of DNA lesions. In mammals, two RAD6-related genes, HR6A and HR6B, encode highly homologous proteins. Here, we describe the phenotype of cells and mice deficient for the mHR6A gene. Just like mHR6B knockout mouse embryonic fibroblasts, mHR6A-deficient cells appear to have normal DNA damage resistance properties, but mHR6A knockout male and female mice display a small decrease in body weight. The necessity for at least one functional mHR6A (X-chromosomal) or mHR6B (autosomal) allele in all somatic cell types is supported by the fact that neither animals lacking both proteins nor females with only one intact mHR6A allele are viable. In striking contrast to mHR6B knockout males, which show a severe spermatogenic defect, mHR6A knockout males are normally fertile. However, mHR6A knockout females fail to produce offspring despite a normal ovarian histology and ovulation. The absence of mHR6A in oocytes prevents development beyond the embryonic two-cell stage but does not result in an aberrant methylation pattern of histone H3 at this early stage of mouse embryonic development. These observations support redundant but dose-dependent roles for HR6A and HR6B in somatic cell types and germ line cells in mammals.</description>
    </item> <item>
      <title>Ubiquitin ligase Rad18Sc localizes to the XY body and to other chromosomal regions that are unpaired and transcriptionally silenced during male meiotic prophase (Article)</title>
      <link>http://repub.eur.nl/res/pub/8366/</link>
      <pubDate>2004-01-01T00:00:00Z</pubDate>
      <description>In replicative damage bypass (RDB) in yeast, the ubiquitin-conjugating enzyme RAD6 interacts with the ubiquitin ligase RAD18. In the mouse, these enzymes are represented by two homologs of RAD6, HR6a and HR6b, and one homolog of RAD18, Rad18Sc. Expression of these genes and the encoded proteins is ubiquitous, but there is relatively high expression in the testis. We have studied the subcellular localization by immunostaining Rad18Sc and other RDB proteins in mouse primary spermatocytes passing through meiotic prophase in spermatogenesis. The highest Rad18Sc protein level is found at pachytene and diplotene, and the protein localizes mainly to the XY body, a subnuclear region that contains the transcriptionally inactivated X and Y chromosomes. In spermatocytes that carry translocations for chromosomes 1 and 13, Rad18Sc protein concentrates on translocation bivalents that are not fully synapsed. The partly synapsed bivalents are often localized in the vicinity of the XY body, and show a very low level of RNA polymerase II, indicating that the chromatin is in a silent configuration similar to transcriptional silencing of the XY body. Thus, Rad18Sc localizes to unsynapsed and silenced chromosome segments during the male meiotic prophase. All known functions of RAD18 in yeast are related to RDB. However, in contrast to Rad18Sc, expression of UBC13 and poleta, known to be involved in subsequent steps of RDB, appears to be diminished in the XY body and regions containing the unpaired translocation bivalents. Taken together, these observations suggest that the observed subnuclear localization of Rad18Sc may involve a function outside the context of RDB. This function is probably related to a mechanism that signals the presence of unsynapsed chromosomal regions and subsequently leads to transcriptional silencing of these regions during male meiotic prophase.</description>
    </item> <item>
      <title>The ubiquitin-conjugating DNA repair enzyme is a maternal factor essential for early embryonic development in mice (Article)</title>
      <link>http://repub.eur.nl/res/pub/3221/</link>
      <pubDate>2004-01-01T00:00:00Z</pubDate>
      <description>The Saccharomyces cerevisiae RAD6 protein is required for a surprising diversity of cellular processes, including sporulation and replicational damage bypass of DNA lesions. In mammals, two RAD6-related genes, HR6A and HR6B, encode highly homologous proteins. Here, we describe the phenotype of cells and mice deficient for the mHR6A gene. Just like mHR6B knockout mouse embryonic fibroblasts, mHR6A-deficient cells appear to have normal DNA damage resistance properties, but mHR6A knockout male and female mice display a small decrease in body weight. The necessity for at least one functional mHR6A (X-chromosomal) or mHR6B (autosomal) allele in all somatic cell types is supported by the fact that neither animals lacking both proteins nor females with only one intact mHR6A allele are viable. In striking contrast to mHR6B knockout males, which show a severe spermatogenic defect, mHR6A knockout males are normally fertile. However, mHR6A knockout females fail to produce offspring despite a normal ovarian histology and ovulation. The absence of mHR6A in oocytes prevents development beyond the embryonic two-cell stage but does not result in an aberrant methylation pattern of histone H3 at this early stage of mouse embryonic development. These observations support redundant but dose-dependent roles for HR6A and HR6B in somatic cell types and germ line cells in mammals.</description>
    </item> <item>
      <title>Loss of HR6B ubiquitin-conjugating activity results in damaged synaptonemal complex structure and increased crossing-over frequency during the male meiotic prophase (Article)</title>
      <link>http://repub.eur.nl/res/pub/10083/</link>
      <pubDate>2003-01-01T00:00:00Z</pubDate>
      <description>The ubiquitin-conjugating enzymes HR6A and HR6B are the two mammalian homologs of Saccharomyces cerevisiae RAD6. In yeast, RAD6 plays an important role in postreplication DNA repair and in sporulation. HR6B knockout mice are viable, but spermatogenesis is markedly affected during postmeiotic steps, leading to male infertility. In the present study, increased apoptosis of HR6B knockout primary spermatocytes was detected during the first wave of spermatogenesis, indicating that HR6B performs a primary role during the meiotic prophase. Detailed analysis of HR6B knockout pachytene nuclei showed major changes in the synaptonemal complexes. These complexes were found to be longer. In addition, we often found depletion of synaptonemal complex proteins from near telomeric regions in the HR6B knockout pachytene nuclei. Finally, we detected an increased number of foci containing the mismatch DNA repair protein MLH1 in these nuclei, reflecting a remarkable and consistent increase (20 to 25%) in crossing-over frequency. The present findings reveal a specific requirement for the ubiquitin-conjugating activity of HR6B in relation to dynamic aspects of the synaptonemal complex and meiotic recombination in spermatocytes</description>
    </item> <item>
      <title>Loss of HR6B ubiquitin-conjugating activity results in damaged synaptonemal complex structure and increased crossing-over frequency during the male meiotic prophase. (Article)</title>
      <link>http://repub.eur.nl/res/pub/3207/</link>
      <pubDate>2003-01-01T00:00:00Z</pubDate>
      <description>The ubiquitin-conjugating enzymes HR6A and HR6B are the two mammalian homologs of Saccharomyces cerevisiae RAD6. In yeast, RAD6 plays an important role in postreplication DNA repair and in sporulation. HR6B knockout mice are viable, but spermatogenesis is markedly affected during postmeiotic steps, leading to male infertility. In the present study, increased apoptosis of HR6B knockout primary spermatocytes was detected during the first wave of spermatogenesis, indicating that HR6B performs a primary role during the meiotic prophase. Detailed analysis of HR6B knockout pachytene nuclei showed major changes in the synaptonemal complexes. These complexes were found to be longer. In addition, we often found depletion of synaptonemal complex proteins from near telomeric regions in the HR6B knockout pachytene nuclei. Finally, we detected an increased number of foci containing the mismatch DNA repair protein MLH1 in these nuclei, reflecting a remarkable and consistent increase (20 to 25%) in crossing-over frequency. The present findings reveal a specific requirement for the ubiquitin-conjugating activity of HR6B in relation to dynamic aspects of the synaptonemal complex and meiotic recombination in spermatocytes.</description>
    </item> <item>
      <title>DNA repair mechanisms and gametogenesis (Article)</title>
      <link>http://repub.eur.nl/res/pub/9599/</link>
      <pubDate>2001-01-01T00:00:00Z</pubDate>
      <description>In mammals, there is a complex and intriguing relationship between DNA
          repair and gametogenesis. DNA repair mechanisms are involved not only in
          the repair of different types of DNA damage in developing germline cells,
          but also take part in the meiotic recombination process. Furthermore, the
          DNA repair mechanisms should tolerate mutations occurring during
          gametogenesis, to a limited extent. In the present review, several
          gametogenic aspects of DNA mismatch repair, homologous recombination
          repair and postreplication repair are discussed. In addition, the role of
          DNA damage-induced cell cycle checkpoint control is considered briefly. It
          appears that many genes encoding proteins that take part in DNA repair
          mechanisms show enhanced or specialized expression during mammalian
          gametogenesis, and several gene knockout mouse models show male or female
          infertility. On the basis of such knowledge and models, future experiments
          may provide more information about the precise relationship between DNA
          repair, chromatin dynamics, and genomic stability versus instability
          during gametogenesis.</description>
    </item> <item>
      <title>Characterization of mRAD18Sc, a mouse homolog of the yeast post-replication repair gene RAD18. (Article)</title>
      <link>http://repub.eur.nl/res/pub/3167/</link>
      <pubDate>2000-10-01T00:00:00Z</pubDate>
      <description>The RAD18 gene of the yeast Saccharomyces cerevisiae encodes a protein with ssDNA binding activity that interacts with the ubiquitin-conjugating enzyme RAD6 and plays an important role in postreplication repair. We identified and characterized the putative mouse homolog of RAD18, designated mRAD18Sc. The mRAD18Sc open reading frame encodes a 509-amino-acid polypeptide that is strongly conserved in size and sequence between yeast and mammals, with specific conservation of the RING-zinc-finger and the classic zinc-finger domain. The degree of sequence conservation between mRAD18Sc, RAD18, and homologous sequences identified in other species (NuvA from Aspergillus nidulans and Uvs-2 from Neurospora crassa) is entirely consistent with the evolutionary relationship of these organisms, strongly arguing that these genes are one another's homologs. Consistent with the presence of a nuclear translocation signal in the amino acid sequence, we observed the nuclear localization of GFP-tagged mRAD18Sc after stable transfection to HeLa cells. mRNA expression of mRAD18Sc in the mouse was observed in thymus, spleen, brain, and ovary, but was most pronounced in testis, with the highest level of expression in pachytene-stage primary spermatocytes, suggesting that mRAD18Sc plays a role in meiosis of spermatogenesis. Finally, we mapped the mRAD18Sc gene on mouse chromosome 6F.</description>
    </item> <item>
      <title>Immunoexpression of testis-specific histone 2B in human spermatozoa and testis tissue (Article)</title>
      <link>http://repub.eur.nl/res/pub/8871/</link>
      <pubDate>1998-01-01T00:00:00Z</pubDate>
      <description>During mammalian spermatogenesis, the chromatin of the spermatogenic cells
          is profoundly reorganized. Somatic histones are partly replaced by
          testis-specific histones. These histones are then replaced by transition
          proteins and finally by protamines. This series of nucleoprotein
          rearrangements results in a highly condensed sperm cell nucleus. In
          contrast to spermatozoa from other species, human spermatozoa still
          contain a significant amount of histones, including testis-specific
          histone 2B (TH2B). In the present study it is shown that an antibody
          targeting tyrosine hydroxylase, which has been found previously to
          cross-react with rat TH2B, also specifically immunoreacts with human TH2B
          on Western blots, in immunohistochemistry of human testis tissue, and in
          immunocytochemistry of decondensed human spermatozoa. In human testis
          tissue, TH2B immunostaining first apparent in spermatogonia, shows marked
          variation, especially at the pachytene spermatocyte stage, and then
          reaches an intense signal in round spermatids. Shortly before spermatid
          elongation, a portion of the spermatid nucleus, corresponding to the
          acrosomal region, loses its immunoreactivity. During condensation of the
          spermatid nucleus, the immunodetectability of TH2B disappears gradually,
          from the anterior region of the nucleus onwards. At the final stages of
          spermiogenesis, the immunostaining is completely absent.
          Immunocytochemical staining of spermatozoa revealed no TH2B immunosignal,
          but immunostaining was observed when spermatozoa obtained from semen were
          decondensed to make nuclear proteins accessible to the antibody. There
          was, however, a striking intercellular variability in the intensity of
          staining of spermatozoa within an ejaculate. In a population of 35 men
          attending our Andrology Clinic, we observed interindividual differences in
          total sperm TH2B content, which showed a significant, although not very
          pronounced, negative correlation with normal morphology (P = 0.05).</description>
    </item> <item>
      <title>Inactivation of the HR6B ubiquitin-conjugating DNA repair enzyme in mice causes male sterility associated with chromatin modification. (Article)</title>
      <link>http://repub.eur.nl/res/pub/3103/</link>
      <pubDate>1996-09-06T00:00:00Z</pubDate>
      <description>The ubiquitin-conjugating yeast enzyme RAD6 and its human homologs hHR6A and hHR6B are implicated in postreplication repair and damage-induced mutagenesis. The yeast protein is also required for sporulation and may modulate chromatin structure via histone ubiquitination. We report the phenotype of the first animal mutant in the ubiquitin pathway: inactivation of the hHR6B-homologous gene in mice causes male infertility. Derailment of spermatogenesis becomes overt during the postmeiotic condensation of chromatin in spermatids. These findings provide a parallel between yeast sporulation and mammalian spermatogenesis and strongly implicate hHR6-dependent ubiquitination in chromatin remodeling. Since heterozygous male mice and even knockout female mice are completely normal and fertile and thus able to transmit the defect, similar hHR6B mutations may cause male infertility in man.</description>
    </item> <item>
      <title>Anti-Müllerian hormone and androgens: regulation of receptors during sex differentiation and gonadal development (Doctoral Thesis)</title>
      <link>http://repub.eur.nl/res/pub/21993/</link>
      <pubDate>1995-09-20T00:00:00Z</pubDate>
      <description>This chapter gives an outline of sex determination, sex differentiation, and gonadal
development in mammalian species. In most studies described herein, rats and mice
were used.
During embryonal development in mammals, sex differentiation is preceded by a
bipotential stage. Indifferent gonads are formed that can develop into eilher testes or
ovaries. The anlagen of the male and female intemal genitalia, which are both present
in embryos of either chromosomal sex, are called the wolffian and the mullerian ducts,
respectively.</description>
    </item> <item>
      <title>A novel member of the transmembrane serine/threonine kinase receptor family is specifically expressed in the gonads and in mesenchymal cells adjacent to the mullerian duct (Article)</title>
      <link>http://repub.eur.nl/res/pub/8588/</link>
      <pubDate>1994-01-01T00:00:00Z</pubDate>
      <description>The activin and TGF-beta type II receptors are members of a separate
          subfamily of transmembrane receptors with intrinsic protein kinase
          activity, which also includes the recently cloned TGF-beta type I
          receptor. We have isolated and characterized a cDNA clone (C14) encoding a
          new member of this subfamily. The domain structure of the C14-encoded
          protein corresponds with the structure of the other known transmembrane
          serine/threonine kinase receptors. It also contains the two inserts in the
          kinase domain that are characteristic for this subfamily. Using in situ
          hybridization, C14 mRNA was detected in the mesenchymal cells located
          adjacent to the mullerian ducts of males and females at day 15 (E15) of
          embryonic development. Marked C14 mRNA expression was also detected in the
          female gonads. In female E16 embryos, the C14 mRNA expression pattern
          remained similar to that in E15 embryos. However, in male E16 embryos C14
          mRNA was detected in a circular area that includes the degenerating
          mullerian duct. The expression of C14 mRNA was also studied using RNase
          protection assays. At E15 and E16, C14 mRNA is expressed in the female as
          well as in the male urogenital ridge. However, at E19, a high C14 mRNA
          level in the female urogenital ridge contrasts with a lack of C14 mRNA in
          the male urogenital ridge. This correlates with the almost complete
          degeneration of the mullerian ducts in male embryos at E19. C14 mRNA
          expression was also detected in embryonic testes at E15, E16 and E19 using
          RNase protection assays, but at much lower levels than those found in the
          developing ovaries.(ABSTRACT TRUNCATED AT 250 WORDS)</description>
    </item> <item>
      <title>Transcriptional regulation of androgen receptor gene expression in Sertoli cells and other cell types (Article)</title>
      <link>http://repub.eur.nl/res/pub/8883/</link>
      <pubDate>1992-01-01T00:00:00Z</pubDate>
      <description>Cooperative actions of FSH and androgens on initiation, maintenance, and
      restoration of spermatogenesis have been described. In the present
      experiments the regulatory effects of FSH on androgen receptor (AR) gene
      expression in Sertoli cells were studied. In immature rats injection of
      FSH (1 microgram/g BW, ip) resulted in a rapid down-regulation of
      testicular AR mRNA expression (4 h), followed by recovery to the control
      level (10 h). Using cultured immature Sertoli cells, a similar transient
      effect on AR mRNA expression was observed after the addition of FSH (500
      ng/ml) or (Bu)2cAMP (0.5 mM). Cycloheximide treatment of the cells did not
      prevent the rapid FSH-induced down-regulation of AR mRNA expression,
      indicating that de novo protein synthesis is not required for this effect.
      Furthermore, using a transcriptional run-on assay, no marked decrease in
      the rate of AR gene transcription was found upon treatment of the cultured
      Sertoli cells with FSH for 2 or 4 h. This demonstrates that the short term
      effect of FSH or AR mRNA expression reflects a change in mRNA stability.
      The AR protein level was not markedly affected by the transient decrease
      in AR mRNA expression. When immature Sertoli cells were incubated with FSH
      for longer time periods (24-72 h), both AR mRNA and protein expression
      were increased. In Sertoli cells isolated from 15-day-old rats, this
      increase was higher (mRNA, 2- to 3-fold; protein, 2-fold) than in Sertoli
      cells isolated from 25-day-old animals. The results indicate that FSH
      plays a complex role in the regulation of AR expression in immature rat
      Sertoli cells</description>
    </item> <item>
      <title>Transient down-regulation of androgen receptor messenger ribonucleic acid (mRNA) expression in Sertoli cells by follicle-stimulating hormone is followed by up-regulation of androgen receptor mRNA and protein (Article)</title>
      <link>http://repub.eur.nl/res/pub/8886/</link>
      <pubDate>1992-01-01T00:00:00Z</pubDate>
      <description>In Sertoli cells from 21-day-old rats, the expression of the mRNA encoding
      the alpha-subunit of inhibin, and the production of immunoreactive inhibin
      are stimulated by follicle-stimulating hormone (FSH). In contrast, the
      amount of beta B-subunit mRNA is not increased after FSH treatment of the
      cells, and the ratio between bioactive and immunoactive inhibin decreases
      after stimulation with FSH. These data suggest that the beta B-subunit is
      the limiting factor in the production of bioactive inhibin. The aim of the
      present experiments was to investigate the effect of changes in the amount
      of beta B-subunit mRNA on the production of bioactive and immunoreactive
      inhibin. During early postnatal testicular development, the relative
      amounts of the 4.2 kb and 3.5 kb mRNAs encoding the beta B-subunit of
      inhibin changed markedly. The meaning of this changing ratio between beta
      B-subunit mRNAs is not clear, since both mRNAs are actively translated, as
      demonstrated by polysomal analysis. The total amount of beta B-subunit
      mRNA correlated with the in vitro production of bioactive inhibin as
      published earlier. Prolonged stimulation of cultured Sertoli cells from
      14-day-old rats with 4 beta-phorbol 12-myristate 13-acetate (PMA) caused a
      decreased expression of the beta B-subunit mRNAs, presumably by
      down-regulation of protein kinase C. A similar effect was obtained after
      addition of the calcium ionophore A23187. Concomitantly, a decreased
      production of bioactive inhibin was observed. Furthermore, Western
      blotting revealed that secretion of the 32 kDa inhibin alpha beta-dimer
      was decreased, whereas secretion of the combination of the C-terminal part
      with the pro-region of the alpha-subunit was increased. It is concluded
      that the level of the beta B-subunit of inhibin is rate-limiting for the
      production of bioactive inhibin in cultured Sertoli cells, and that its
      expression can be influenced by modulation of protein kinase C, and/or
      intracellular calcium levels.</description>
    </item> <item>
      <title>Follitropin receptor down-regulation involves a cAMP-dependent post-transcriptional decrease of receptor mRNA expression (Article)</title>
      <link>http://repub.eur.nl/res/pub/8887/</link>
      <pubDate>1991-01-01T00:00:00Z</pubDate>
      <description>The androgen receptor (AR) is activated upon binding of testosterone or
      dihydrotestosterone and exerts regulatory effects on gene expression in
      androgen target cells. To study transcriptional regulation of the rat AR
      gene itself, the 5' genomic region of this gene was cloned from a genomic
      library and the promoter was identified. S1-nuclease protection analysis
      showed two major transcription start sites, located between 1010 and 1023
      bp upstream from the translation initiation codon. The area surrounding
      these start sites was cloned in both orientations in a CAT reporter
      plasmid. Upon transfection of the constructs into COS cells, part of the
      promoter stimulated transcription in an orientation-independent manner,
      but the full promoter showed a higher and unidirectional activity. In the
      promoter/reporter gene constructs, transcription initiated from the same
      positions as in the native gene. Sequence analysis showed that the
      promoter of the rat AR gene lacks typical TATA and CCAAT box elements, but
      one SP1 site is located at about 60 bp upstream from the major start site
      of transcription. Other possible promoter elements are TGTYCT sequences at
      positions -174 to -179, -434 to -439., -466 to -471, and -500 to -505,
      resembling half-sites of the glucocorticoid-responsive element (GRE).
      Furthermore, a homopurine stretch containing a total of 8 GGGGA elements
      and similar to sequences that are present in several other GC-rich
      promoters, is located between -89 and -146 bp upstream from the major
      start site of transcription.</description>
    </item> <item>
      <title>The rat androgen receptor gene promoter (Article)</title>
      <link>http://repub.eur.nl/res/pub/8890/</link>
      <pubDate>1990-01-01T00:00:00Z</pubDate>
      <description>The androgen receptor (AR) is activated upon binding of testosterone or
      dihydrotestosterone and exerts regulatory effects on gene expression in
      androgen target cells. To study transcriptional regulation of the rat AR
      gene itself, the 5' genomic region of this gene was cloned from a genomic
      library and the promoter was identified. S1-nuclease protection analysis
      showed two major transcription start sites, located between 1010 and 1023
      bp upstream from the translation initiation codon. The area surrounding
      these start sites was cloned in both orientations in a CAT reporter
      plasmid. Upon transfection of the constructs into COS cells, part of the
      promoter stimulated transcription in an orientation-independent manner,
      but the full promoter showed a higher and unidirectional activity. In the
      promoter/reporter gene constructs, transcription initiated from the same
      positions as in the native gene. Sequence analysis showed that the
      promoter of the rat AR gene lacks typical TATA and CCAAT box elements, but
      one SP1 site is located at about 60 bp upstream from the major start site
      of transcription. Other possible promoter elements are TGTYCT sequences at
      positions -174 to -179, -434 to -439., -466 to -471, and -500 to -505,
      resembling half-sites of the glucocorticoid-responsive element (GRE).
      Furthermore, a homopurine stretch containing a total of 8 GGGGA elements
      and similar to sequences that are present in several other GC-rich
      promoters, is located between -89 and -146 bp upstream from the major
      start site of transcription</description>
    </item>
  </channel>
</rss>