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    <title>Bakker, M.A. den</title>
    <link>http://repub.eur.nl/res/aut/11270/</link>
    <description>List of Publications</description>
    <language>en</language>
    <image>
      <url>http://repub.eur.nl/static-eur/img/logo.png</url>
      <title>RePub, Erasmus University Rotterdam</title>
      <link>http://repub.eur.nl</link>
    </image>
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      <title>SDHA mutations in adult and pediatric wild-type gastrointestinal stromal tumors (Article)</title>
      <link>http://repub.eur.nl/res/pub/39729/</link>
      <pubDate>2013-03-01T00:00:00Z</pubDate>
      <description>Most gastrointestinal stromal tumors (GISTs) harbor oncogenic mutations in KIT or platelet-derived growth factor receptor-α. However, a small subset of GISTs lacks such mutations and is termed 'wild-type GISTs'. Germline mutation in any of the subunits of succinate dehydrogenase (SDH) predisposes individuals to hereditary paragangliomas and pheochromocytomas. However, germline mutations of the genes encoding SDH subunits A, B, C or D (SDHA, SDHB, SDHC or SDHD; collectively SDHx) are also identified in GISTs. SDHA and SDHB immunohistochemistry are reliable techniques to identify pheochromocytomas and paragangliomas with mutations in SDHA, SDHB, SDHC and SDHD. In this study, we investigated if SDHA immunohistochemistry could also identify SDHA-mutated GISTs. Twenty-four adult wild-type GISTs and nine pediatric/adolescent wild-type GISTs were analyzed with SDHB, and where this was negative, then with SDHA immunohistochemistry. If SDHA immunohistochemistry was negative, sequencing analysis of the entire SDHA coding sequence was performed. All nine pediatric/adolescent GISTs and seven adult wild-type GISTs were negative for SDHB immunohistochemistry. One pediatric GIST and three SDHB-immunonegative adult wild-type GISTs were negative for SDHA immunohistochemistry. In all four SDHA-negative GISTs, a germline SDHA c.91C&gt;T transition was found leading to a nonsense p.Arg31X mutation. Our results demonstrate that SDHA immunohistochemistry on GISTs can identify the presence of an SDHA germline mutation. Identifying GISTs with deficient SDH activity warrants additional genetic testing, evaluation and follow-up for inherited disorders and paragangliomas. </description>
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      <title>Combined therapy for thyroid squamous cell carcinoma (Article)</title>
      <link>http://repub.eur.nl/res/pub/34858/</link>
      <pubDate>2012-01-01T00:00:00Z</pubDate>
      <description>Background. Squamous carcinoma of the thyroid is a rare aggressive disease, resulting in poor prognosis. Methods. and Results. We combined cisplatin with paclitaxel on a weekly basis as induction therapy, achieving a high cumulative dose, in a patient with squamous cell tumor of the thyroid with arterial encasement. After surgery, pathologic examination confirmed a complete resection of the primary tumor with clear margins, revealing a successful induction treatment with chemotherapy. Conclusions. Our patient now has a recurrence-free survival of &gt;20 months, longer than the mean survival described in the literature. </description>
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      <title>Expression profiling-based subtyping identifies novel non-small cell lung cancer subgroups and implicates putative resistance to pemetrexed therapy (Article)</title>
      <link>http://repub.eur.nl/res/pub/34767/</link>
      <pubDate>2012-01-01T00:00:00Z</pubDate>
      <description>Introduction: A challenge of cancer therapy is to optimize therapeutical options to individual patients. Cancers with similar histology may show dramatically different responses to therapy, indicating that a refined approach needs to be developed to classify tumors by intrinsic characteristics that may predict response to chemotherapy. Global expression profile-based classification has the potential to identify such tumor-intrinsic subclasses. Pemetrexed effectiveness has been related to the expression of its target thymidylate synthase. The relatively frequent resistance of squamous cell carcinoma to Pemetrexed is correlated with high levels of thymidylate synthase expression. Methods: A global expression profile-based molecular classification of non-small cell lung cancer (NSCLC) was performed. Gene expression was used to predict Pemetrexed responsiveness. The distinct molecular attributes of NSCLCs predicted likely to be resistant to Pemetrexed were bioinformatically characterized. We tested if routine immunohistochemical markers can be used to distinguish putative Pemetrexed responders, predicted by gene signatures, from nonresponders. Results: Ninety NSCLCs were divided into six subclasses by gene expression signatures. The relevance of this novel phenotyping was linked to other tumor characteristics. Two of the subclasses correlated to putative Pemetrexed resistance. In addition, the identified signature genes characterizing putative Pemetrexed responsiveness predicted therapeutic benefit in a subset of squamous cell carcinoma. Conclusions: Gene expression signatures can be used to identify NSCLC subgroups and have potential to predict resistance to Pemetrexed therapy. We suggest that a combination of classical pathological markers can be used to identify molecular tumor subclasses associated with predicted Pemetrexed response. Copyright </description>
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      <title>Long-term results of tumor necrosis factor α- and melphalan-based isolated limb perfusion in locally advanced extremity soft tissue sarcomas (Article)</title>
      <link>http://repub.eur.nl/res/pub/33901/</link>
      <pubDate>2011-10-20T00:00:00Z</pubDate>
      <description>Purpose: Because there is no survival benefit of amputation for extremity soft tissue sarcomas (STSs), limb-sparing surgery has become the gold standard. Tumor size reduction by induction therapy to render nonresectable tumors resectable or facilitate function-preserving surgery can be achieved by tumor necrosis factor α (TNF) -based and melphalan-based isolated limb perfusion (TM-ILP). This study reports the long-term results of 231 TM-ILPs for locally advanced extremity STS. Patients and Methods: We analyzed 231 TM-ILPs in 208 consecutive patients (1991 to 2005), who were all candidates for functional or anatomic amputation for locally advanced extremity STS. All patients had a potential follow-up of up to 5 years. TM-ILP was performed under mild hyperthermic conditions with 1 to 4 mg of TNF and 10 to 13 mg/L of limb-volume melphalan. Almost all patients (85%) had intermediate- or high-grade tumors. Results: The overall response rate (ORR) was 71% (complete response, 18%; partial response, 53%). Multifocal sarcomas had a significantly better ORR of 83% (P = .008). The local recurrence rate was 30% (n = 70); local recurrence rates were highest for multifocal tumors (54%; P = .001) and after previous radiotherapy (54%; P&lt;.001). Five-year overall survival rate was 42%. Survival was poorest in patients with large tumors (P = .01) and with leiomyosarcomas (P &lt; .001). Limb salvage rate was 81%. Conclusion: We demonstrated that TM-ILP results in a limb salvage rate of 81% in patients with locally advanced extremity STS who would otherwise have undergone amputation. Whenever an amputation is deemed necessary to obtain local control of an extremity STS, TM-ILP should be considered. </description>
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      <title>Diagnosis of testicular carcinoma in situ'(intratubular and microinvasive)' seminoma and embryonal carcinoma using direct enzymatic alkaline phosphatase reactivity on frozen histological sections (Article)</title>
      <link>http://repub.eur.nl/res/pub/23886/</link>
      <pubDate>2011-02-01T00:00:00Z</pubDate>
      <description>Aims: Testis-sparing surgery might benefit quality of life, but can only be applied with histological examination for the presence of invasive germ cell tumour components, and the precursor carcinoma in situ (CIS). Currently, diagnosis is based on paraffin-embedded tissue, therefore a delay in further surgery is mainly unavoidable. The aim was to develop an intraoperative assessment technique using alkaline phosphatase as a marker. Methods and results: A total of 4093 snap-frozen samples and matched paraffin-embedded tissue of 1500 patients were included. Besides standard haematoxylin and eosin (H&amp;E) staining, the direct enzymatic alkaline phosphatase reactivity (dAP) test (duration 15min) was applied on frozen sections, while H&amp;E and immunohistochemistry for detection of OCT3/4, α-fetoprotein, human chorionic gonadotrophin (hCG) and cytokeratin was performed on the paraffin-embedded slides. Endothelial cells served as control for the dAP test. Positive staining was found in all CIS (n=965), seminoma (n=1035) and embryonal carcinoma (n=584), either intratubular, microinvasive or invasive. Differentiated non-seminomas (n=1238) showed variable staining. No staining was identified in spermatocytic seminomas (n=5), testicular lymphomas (n=42), testicular rhabdomyosarcomas (n=7), Leydig cell tumours (n=31), Sertoli-cell-only nodules (n=4), (epi) dermoid cyst (n=16), normal testicular parenchyma (n=116), testicular torsion (n=32) and inflammation of the epididymis (n=19). The dAP test results matched H&amp;E-stained parallel sections, as well paraffin-embedded tissue analysis, including immunohistochemistry. Conclusions: The dAP test is an informative, reproducible and easy tool to diagnose CIS, (intratubular and microinvasive) seminoma and embryonal carcinoma on frozen tissue sections, being of great value in the context of sparing surgery. </description>
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      <title>Diagnostic accuracy of fine-needle aspiration cytology in Warthin tumors (Article)</title>
      <link>http://repub.eur.nl/res/pub/28328/</link>
      <pubDate>2010-12-01T00:00:00Z</pubDate>
      <description>Background: Our aim was to evaluate the diagnostic accuracy of fine-needle aspiration cytology (FNAC) for Warthin tumors of the parotid gland. Methods All cytologic diagnoses of Warthin tumor between 1990 and 2007 were correlated with available histology. In addition, our results were compared to current literature. Results In 310 cases, Warthin tumor was diagnosed by FNAC. In 133 cases, (43%) both cytology and histology were available. In 127 of these 133 cases (95.5%), the diagnosis Warthin tumor was confirmed by histology. In 4 cases (3%), a benign lesion was diagnosed and 2 (1.5%) revealed a malignant lesion. On review, those cytologic diagnoses were not certain. In the literature, 11 missed malignancies (5.4%) in 202 cases were reported. Conclusion The diagnostic accuracy of FNAC for the diagnosis of Warthin tumor is high and the percentage of missed malignant tumors is very low. Our results imply that a cytologic diagnosis of Warthin tumor may justify conservative treatment. </description>
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      <title>Semi-automatic identification of punching areas for tissue microarray building: The tubular breast cancer pilot study (Article)</title>
      <link>http://repub.eur.nl/res/pub/28487/</link>
      <pubDate>2010-11-18T00:00:00Z</pubDate>
      <description>Background: Tissue MicroArray technology aims to perform immunohistochemical staining on hundreds of different tissue samples simultaneously. It allows faster analysis, considerably reducing costs incurred in staining. A time consuming phase of the methodology is the selection of tissue areas within paraffin blocks: no utilities have been developed for the identification of areas to be punched from the donor block and assembled in the recipient block.Results: The presented work supports, in the specific case of a primary subtype of breast cancer (tubular breast cancer), the semi-automatic discrimination and localization between normal and pathological regions within the tissues. The diagnosis is performed by analysing specific morphological features of the sample such as the absence of a double layer of cells around the lumen and the decay of a regular glands-and-lobules structure. These features are analysed using an algorithm which performs the extraction of morphological parameters from images and compares them to experimentally validated threshold values. Results are satisfactory since in most of the cases the automatic diagnosis matches the response of the pathologists. In particular, on a total of 1296 sub-images showing normal and pathological areas of breast specimens, algorithm accuracy, sensitivity and specificity are respectively 89%, 84% and 94%.Conclusions: The proposed work is a first attempt to demonstrate that automation in the Tissue MicroArray field is feasible and it can represent an important tool for scientists to cope with this high-throughput technique. </description>
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      <title>Pigmented black neuroendocrine tumour of the pancreas diagnosed by fine needle aspiration cytology (Article)</title>
      <link>http://repub.eur.nl/res/pub/20500/</link>
      <pubDate>2010-08-01T00:00:00Z</pubDate>
      <description></description>
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      <title>T cell activation upon exposure to patient-derived tumor tissue: A functional assay to select patients for adoptive T cell therapy (Article)</title>
      <link>http://repub.eur.nl/res/pub/20683/</link>
      <pubDate>2010-07-01T00:00:00Z</pubDate>
      <description>Gene-engineered T cell therapy represents a promising strategy to treat cancers. To enable pre-selection of patients sensitive to this type of treatment we have setup and validated a T cell activation assay to test antigen expression on patient-derived tumor tissues. Chimeric antibody-based receptor (CAR) directed against CAIX, currently used in a clinical trial to treat RCC patients, was used as a model receptor. Primary human T cells expressing CAIX CAR were able to respond to CAIX-positive but not CAIX-negative tumor tissue and showed an increased production of IFNγ, TNFα, IL-10 and IL-4, but not IL-2 or IL-5. Tumor tissue driven responses of primary T cells were paralleled by NFAT activation measured in CAR-transduced Jurkat T cells, which was shown to be triggered in a CAR and antigen-specific manner. Next, the reporter gene assay was applied to two independent PSMA CARs, which both mediated NFAT activation in response to tumor tissue. Taken together, a sensitive and donor-independent assay was established to measure T cell activation upon exposure to patient-derived tumor tissue, which may facilitate pre-selection of patients for clinical adoptive T cell therapy.</description>
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      <title>Distinct gene mutation profiles among luminal-type and basal-type breast cancer cell lines (Article)</title>
      <link>http://repub.eur.nl/res/pub/27720/</link>
      <pubDate>2010-05-01T00:00:00Z</pubDate>
      <description>Breast cancer has for long been recognized as a highly diverse tumor group, but the underlying genetic basis has been elusive. Here, we report an extensive molecular characterization of a collection of 41 human breast cancer cell lines. Protein and gene expression analyses indicated that the collection of breast cancer cell lines has retained most, if not all, molecular characteristics that are typical for clinical breast cancers. Gene mutation analyses identified 146 oncogenic mutations among 27 well-known cancer genes, amounting to an average of 3.6 mutations per cell line. Mutations in genes from the p53, RB and PI3K tumor suppressor pathways were widespread among all breast cancer cell lines. Most important, we have identified two gene mutation profiles that are specifically associated with luminal-type and basal-type breast cancer cell lines. The luminal mutation profile involved E-cadherin and MAP2K4 gene mutations and amplifications of Cyclin D1, ERBB2 and HDM2, whereas the basal mutation profile involved BRCA1, RB1, RAS and BRAF gene mutations and deletions of p16 and p14ARF. These subtype-specific gene mutation profiles constitute a genetic basis for the heterogeneity observed among human breast cancers, providing clues for their underlying biology and providing guidance for targeted pharmacogenetic intervention in breast cancer patients. </description>
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      <title>Small cell carcinoma of the lung and large cell neuroendocrine carcinoma interobserver variability (Article)</title>
      <link>http://repub.eur.nl/res/pub/19280/</link>
      <pubDate>2010-02-01T00:00:00Z</pubDate>
      <description>Aims: To test the hypothesis that the published morphological criteria permit reliable segregation of small cell carcinoma of the lung (SCLC) and large cell neuroendocrine carcinoma (LCNEC) cases by determining the interobserver variation. Methods and results: One hundred and seventy cases of SCLC, LCNEC and cases diagnosed as neuroendocrine lung carcinoma before LCNEC had been established as a diagnostic category were retrieved from the archives of the assessor's institutes. A representative haematoxylin and eosin section from each case was selected for review. Batches of cases were circulated among nine pathologists with a special interest in pulmonary pathology. Participants were asked to classify the cases histologically according to the 2004 World Health Organization (WHO) criteria. The diagnoses were collected and κ values calculated. Unanimity of diagnosis was achieved for only 20 cases; a majority diagnosis was reached for 115 cases. In 35 cases no consensus diagnosis could be reached. There was striking variability amongst assessors in diagnosing SCLC and LCNEC. The overall level of agreement for all cases included in this study was fair (κ = 0.40). Conclusions: Using non-preselected cases, the morphological WHO criteria for diagnosing SCLC and LCNEC leave room for subjective pathological interpretation, which results in imprecise categorization of SCLC and LCNEC cases.</description>
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      <title>Radiotherapy for Soft Tissue Sarcomas after Isolated Limb Perfusion and Surgical Resection: Essential for Local Control in All Patients? (Article)</title>
      <link>http://repub.eur.nl/res/pub/21469/</link>
      <pubDate>2010-01-01T00:00:00Z</pubDate>
      <description>Background: Standard treatment for localized soft tissue sarcoma (STS) is resection plus adjuvant radiotherapy (RTx). In approximately 10% of cases, resection would cause severe loss of function or even require amputation because of the extent of disease. Isolated limb perfusion (ILP) with tumor necrosis factor alpha (TNF-α) and melphalan can achieve regression of the tumor, facilitating limb-saving resection. RTx improves local control but may lead to increased morbidity. Methods: In our database of over 500 ILPs, 122 patients with unifocal STS were treated by ILP followed by limb-sparing surgery. All included patients were candidates for amputation. Results: Surgery resulted in 69 R0 resections (57%), and in 53 specimens (43%) resection margins contained microscopic evidence of tumor (R1). Histopathological examination revealed &gt;50% ILP-induced tumor necrosis in 59 cases (48%). RTx was administered in 73 patients (60%). Local recurrence rate was 21% after median follow-up of 31 months (2-182 months). Recurrence was significantly less in patients with &gt;50% ILP-induced necrosis versus ≤50% necrosis (7% vs. 33%, P = 0.001). A similar significant correlation was observed for R0 versus R1 resections (15% vs. 28%, P = 0.04). In 36 patients with R0 resection and &gt;50% necrosis, of whom 21 were spared RTx, no recurrences were observed during follow-up. Conclusions: In patients with locally advanced primary STS, treated with ILP followed by R0 resection, and with &gt;50% ILP-induced necrosis in the resected specimen, RTx is of no further benefit.</description>
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      <title>Outcomes of first-line chemotherapy in patients with advanced or metastatic leiomyosarcoma of uterine and non-uterine origin (Article)</title>
      <link>http://repub.eur.nl/res/pub/25258/</link>
      <pubDate>2009-12-01T00:00:00Z</pubDate>
      <description>Although leiomyosarcomas (LMSs) form the largest subgroup of soft tissue sarcomas (STSs), the efficacy of chemotherapy in this group is largely unclear, partly because older studies are contaminated with gastrointestinal stromal tumors (GISTs). In this retrospective study we investigated the outcome of first line chemotherapy in 65 patients with unresectable or metastatic LMS. The overall response rate (ORR) was 18%; and the median progression-free (PFS) and overall survival (OS) were 3.8 and 9.7 months respectively. No statistically significant differences in outcomes for uterine and non-uterine LMS were found. In non-uterine LMS, however, the PFS and OS seemed to be longer for females than for males, potentially negatively affecting outcomes in this group. If our observations are confirmed in other series, they would suggest that studies performed in STS patients should not only stratify for histological subtype but also for uterine versus non-uterine LMS and for gender. Copyright </description>
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      <title>NUT midline carcinoma of the parotid gland with mesenchymal differentiation (Article)</title>
      <link>http://repub.eur.nl/res/pub/24735/</link>
      <pubDate>2009-08-01T00:00:00Z</pubDate>
      <description>Nuclear protein in testis midline carcinomas (NMC) are highly aggressive carcinomas typically arising in midline structures in young individuals. These carcinomas are characterized by the presence of a chromosomal rearrangement of nuclear protein in testis the (NUT) gene on chromosome 15 (15q14), resulting from a chromosomal translocation most commonly involving the BRD4 gene on chromosome 19p13. Rarely, in about 1/3 of cases, other translocation partners are involved (termed NUT-variants). Most cases have involved midline structures and with few exceptions were located in the upper aerodigestive tract and the mediastinum. Except for a single case, all reported NMC have been fatal, proving resistant to multimodality treatment. We report an exceptional case of a NMC presenting outside of midline structures in the parotid gland and showing mesenchymal chondroid differentiation in a 15-year-old male. The presence of the t(15;19) chromosomal translocation in the chondroid component was confirmed by fluorescence in situ hybridization analysis and immunohistochemical staining, indicating mesenchymal transdifferentation of the tumor. The findings demonstrate the first case of NMC arising within salivary gland, and the first example of mesenchymal differentiation in this group of tumors. </description>
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      <title>Identification of a putative protein-profile associating with tamoxifen therapy-resistance in breast cancer (Article)</title>
      <link>http://repub.eur.nl/res/pub/22152/</link>
      <pubDate>2009-06-08T00:00:00Z</pubDate>
      <description>Tamoxifen-resistance is a major cause of death in patients with recurrent breast cancer. Current clinical parameters can correctly predict therapy response in only half of the treated patients. Identification of proteins that associate with tamoxifen-resistance is a first step towards better response prediction and tailored treatment of patients. 
In the present study we aimed to identify putative protein biomarkers indicative of tamoxifen therapy-resistance in breast cancer, using nanoLC-FTICR MS. Comparative proteome analysis was performed on ~5,500 pooled tumor cells obtained through laser capture microdissection from two independently processed data sets (n=24 and n=27) of tamoxifen therapy-sensitive and -resistant tumors. Peptide and protein identifications were acquired by matching mass and elution time features to information in previously generated accurate mass and time tag reference data bases.  
A total of 17,263 unique peptides were identified that corresponded to 2,556 non-redundant proteins identified with &gt;=2 peptides. From this total, 1,713 proteins overlapped between the two data sets, which were used for further statistical analysis. Comparative proteome analysis of the two data sets combined revealed 100 putatively differentially abundant proteins (p&lt;0.05) between tamoxifen-sensitive and -resistant tumors. The presence and abundance of 47 of these proteins was verified by targeted nanoLC-MS/MS in the same, individual, non-microdissected tumor tissue extracts. ENPP1, EIF3E, and GNB4 significantly associated with progression-free survival upon tamoxifen treatment (p=0.005, p=0.03 and p= 0.04, respectively).
Differential abundance of our top discriminating protein, EMMPRIN, was validated by tissue microarray in an independent patient cohort (n=156). EMMPRIN was not only higher expressed in PD tumors, it also significantly associated with shorter time to progression upon tamoxifen treatment (p=0.002).
In summary, quantitative comparative proteomics was performed on LCM-derived breast tumor cells using ultra-sensitive nanoLC-FTICR technology; this resulted in the identification of putative biomarkers associating with tamoxifen therapy-resistance in recurrent breast cancer.</description>
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      <title>Angiosarcoma of the right atrium presenting as collapse (Article)</title>
      <link>http://repub.eur.nl/res/pub/24379/</link>
      <pubDate>2009-02-06T00:00:00Z</pubDate>
      <description>Pericardial effusion may originate from a wide variety of underlying pathology. Primary cardiac malignancy should always be considered as a rare underlying cause. Angiosarcoma is the most common cardiac malignancy, which often arises as a mass in the right atrium. We describe a young patient with collapse due to pericardial effusion caused by a primary cardiac angiosarcoma. The case is an example of the difficulties and dilemmas which may be encountered in assessing the diagnosis of cardiac angiosarcoma. </description>
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      <title>Histoplasma-associated inflammatory pseudotumour of the kidney mimicking renal carcinoma (Article)</title>
      <link>http://repub.eur.nl/res/pub/19335/</link>
      <pubDate>2009-02-01T00:00:00Z</pubDate>
      <description>A 56-year-old female, originally from Suriname, with an otherwise unremarkable previous medical history was found to have a renal mass highly suspicious for renal cancer for which a nephrectomy was performed. Within the kidney, a tumourous mass was found which, on histological examination, showed an inflammatory pseudotumour caused by Histoplasma capsulatum. Further investigations revealed an idiopathic CD4+ lymphopenia. Mass lesions mimicking a malignant tumour caused by infection with Histoplasma have rarely been described. To the best of our knowledge, this is the first report of a Histoplasma-associated inflammatory pseudotumour mimicking cancer occurring in the kidney.</description>
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      <title>Surfactant pretreatment decreases long-term damage after ischemia-reperfusion injury of the lung (Article)</title>
      <link>http://repub.eur.nl/res/pub/24342/</link>
      <pubDate>2009-02-01T00:00:00Z</pubDate>
      <description>Objective: Lung ischemia-reperfusion injury (LIRI) is a risk factor for primary acute graft failure following lung transplantation. LIRI hereby contributes to morbidity and mortality after lung transplantation. We have previously shown that surfactant pretreatment ameliorates LIRI up to 1 week after reperfusion. However, the impact of surfactant pretreatment on long-term outcome following LIRI is unknown. Therefore, the objective of this study was to investigate the effect of surfactant pretreatment on long-term outcome following LIRI. Methods: Male Sprague-Dawley rats (n = 63) were randomized to receive intratracheally administered porcine surfactant (400 mg/kg) or no pretreatment. One hour thereafter, animals underwent 120 min of warm ischemia by clamping the bronchus, pulmonary artery and vein of the left lung. A third group was sham-operated; a fourth group served as unoperated controls. Animals were killed on day 30 or 90 after surgery. Arterial oxygenation and lung compliance were determined. Broncho-alveolar lavage fluid (BALf) was collected to assess surfactant function and alveolar protein. Leukocyte infiltration was determined by flowcytometry in BALf, lung tissue and thoracic lymph nodes. Lungs of three animals per group were used for histological assessment. Results: Lung compliance was lower on day 30 and day 90 after LIRI than in sham-operated controls (day 30 Vmax6.1 ± 2.1 vs 12.6 ± 1.3, day 90 6.9 ± 3.0 vs 12.1 ± 1.6; Cmaxday 30 0.49 ± 0.17 vs 1.08 ± 0.21, day 90 0.67 ± 0.31 vs 1.11 ± 0.17). Furthermore, the number of CD45RA+-lymphocytes in left lung tissue was decreased on day 90 compared to unoperated animals (230.633 ± 96.770 vs 696.347 ± 202.909) and the number of macrophages elevated in left BALf on day 90. HE slides of LIRI animals were scored as fibroproliferative with moderate atelectasis. Surfactant pretreatment improved lung compliance (Vmaxday 30 11.7 ± 1.8, day 90 11.1 ± 1.2; Cmaxday 30 1.04 ± 0.23, day 90 1.16 ± 0.21) and normalized the number of CD45RA+-lymphocytes (769.555 ± 421.016) in left lung tissue. Furthermore lung architecture on HE slides was on return to normal. However, more CD5+CD4+-lymphocytes on day 30 (754.788 ± 97.269 vs 430.409 ± 109.909) and more macrophages on day 90 (2.144.000 ± 630.633 vs 867.454 ± 383.220) were measured in pretreated lung tissue compared to LIRI animals. Conclusions: Severe LIRI caused extensive pulmonary injury up to 90 days postoperatively. Surfactant pretreatment normalized pulmonary function, but resulted in an increased number of CD5+CD4+-cells and macrophages in lung tissue. </description>
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      <title>Perivascular epithelioid cell tumor of the retroperitoneum in a young woman resulting in an abdominal chyloma (Article)</title>
      <link>http://repub.eur.nl/res/pub/26967/</link>
      <pubDate>2009-02-01T00:00:00Z</pubDate>
      <description>Perivascular epithelioid cell tumor (PEComa) is an extremely rare neoplasm which appears to have predominancy for young, frequently Asian, women. The neoplasm is composed chiefly of HMB-45-positive epithelioid cells with clear to granular cytoplasm and usually showing a perivascular distribution. These tumors have been reported in various organs under a variety of designations. Malignant PEComas exist but are very rare. The difficulty in determining optimal therapy, owing to the sparse literature available, led us to present this case. We report a retroperitoneal PEComa discovered during emergency surgery for abdominal pain in a 28-year-old Asian woman. The postoperative period was complicated by chylous ascites that was initially controlled by a wait-and-see policy with total parenteral nutrition. However, the chyle production gradually increased to more than 4 l per day. The development of a bacterial peritonitis resulted in cessation of production of abdominal fluid permitting normal nutrition without chylous leakage. Effective treatment for this rare complication of PEComa is not yet known; therefore, we have chosen to engage in long-term clinical follow-up. </description>
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      <title>Four human breast cancer cell lines with biallelic inactivating α-catenin gene mutations (Article)</title>
      <link>http://repub.eur.nl/res/pub/17410/</link>
      <pubDate>2009-01-01T00:00:00Z</pubDate>
      <description>Mutations of E-cadherin have been identified in half of lobular breast cancers and diffuse-type gastric cancers, two tumor subtypes with remarkably similar pathological appearances including small rounded cells with scant cytoplasm and a diffuse growth pattern. A causal role for E-cadherin gene mutations in the lobular breast cancer phenotype was recently demonstrated in E-cadherin knock-out mice. These observations suggested that another gene in the E-cadherin tumor suppressor pathway might be mutated in lobular breast cancers with wild-type E-cadherin genes. Here, we identified E-cadherin gene mutations exclusively in human breast cancer cell lines that grow with a rounded cell morphology. Using expression analyses and gene mutation analyses, we have identified four biallelic inactivating α-catenin mutations among 55 human breast cancer cell lines. All four α-catenin mutations predicted premature termination of the encoded proteins, and concordantly, none of the four mutant cell lines expressed α-catenin proteins. Importantly, three of the α-catenin mutant cell lines had the rounded cell morphology and all 14 cell lines with the rounded cell morphology had mutations of either E-cadherin or α-catenin. As anticipated, loss of α-catenin protein expression was associated with the lobular subtype in primary breast cancers. Together, our observations suggest that α-catenin may be a new tumor suppressor gene that operates in the E-cadherin tumor suppressor pathway.</description>
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      <title>Glomus tumor of the mesentery with atypical features: A case report (Article)</title>
      <link>http://repub.eur.nl/res/pub/30153/</link>
      <pubDate>2008-10-01T00:00:00Z</pubDate>
      <description>Glomus tumors usually occur in the acral soft tissue and rarely in visceral locations, such as the stomach, intestines, mediastinum, lung, pancreas, bladder, and vagina. The authors present a 74-year-old woman with an exceptionally large glomus tumor of the mesentrium with malignant features. Previously reported cases of intraabdominal glomus tumor in the abdominal cavity exhibited benign behavior and few cases with metastatic disease. Criteria for malignancy in acral glomus tumors, such as unusually large size, infiltrative growth, necrosis, nuclear atypia, and mitotic activity, seem not to translate to abdominal glomus tumors. As very few intraabdominal glomus are described, the malignant potential of these tumors stays uncertain for longer period. </description>
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      <title>Selective neck dissection for N0 and N1 oral cavity and oropharyngeal cancer: Are skip metastases a real danger? (Article)</title>
      <link>http://repub.eur.nl/res/pub/30500/</link>
      <pubDate>2008-10-01T00:00:00Z</pubDate>
      <description>Objectives: To contribute to insight in therapeutic safety of selective neck dissections for oral cavity and oropharyngeal cancer with a special focus on the risk of skip metastases. Design: Retrospective data analysis. Setting: Tertiary referral centre. Participants: A total of 291 patients operated for oral cavity or oropharyngeal squamous cell cancer between 1999 and 2004. Main outcome measures: Incidence of skip metastases in both pathologically N0 and N+ necks for oral cavity and oropharyngeal cancer. Results: Of all neck dissections (n = 226) performed for oral cavity cancer, skip metastases to level III or level IV occurred in 14 cases (6%). Ten skip metastases occurred in level III only (10/226 = 4%). Thus, four necks had metastases in level IV, which would not have been removed in case of a Selective neck dissection level I-III (supraomohyoid neck dissection). In case of oropharyngeal cancer, skip metastases to level III or level IV occurred in six of 92 cases (7%). Five skip metastases occurred in level III only (5/92 = 5%). This means that of the necks containing skip metastases, only one neck (1%): had metastases in level IV, which would not have been removed in case of a Selective neck dissection level I-III (Supraomohyoid neck dissection). Conclusions: The question whether level IV should be included in the treatment of N0 and even N1 necks of patients with cancer of the oral cavity and oropharynx cannot be answered by all data available to us now. The fear of skip metastases including level IV does not seem to be justified. </description>
    </item> <item>
      <title>Interobserver variation in the classification of thymic tumours - A multicentre study using the WHO classification system (Article)</title>
      <link>http://repub.eur.nl/res/pub/29748/</link>
      <pubDate>2008-08-01T00:00:00Z</pubDate>
      <description>Aims: To test the reproducibility of the current World Health Organization (WHO) classification of thymic epithelial tumours and to determine the level of interobserver variation within a group of pathologists, all with experience and expertise in thoracic pathology. Methods and results: Ninety-five thymic tumours were circulated to a group of 17 pathologists in the UK and The Netherlands over a 1-year period. Participants were asked to classify them according to WHO criteria. The diagnoses were subjected to statistical analysis and κ values calculated. The overall level of agreement was moderate (κ 0.45). When the categories were reduced in number by creating two groups, (A + AB + B1 + B2 and B3 + C), the level of agreement increased to 0.62. An alternative grouping (A + AB + B1 and B2 + B3 + C) increased it slightly further. The best agreement was in tumour types A and AB. Difficulties arose in distinguishing B1 tumours from B2 tumours and B2 tumours from B3 tumours. Conclusions: Although the WHO system describes a number of well-defined tumour types with clear diagnostic criteria, the overall level of agreement was moderate and improved if some groups were amalgamated. </description>
    </item> <item>
      <title>Decrease of CD117 expression as possible prognostic marker for recurrence in the resected specimen after imatinib treatment in patients with initially unresectable gastrointestinal stromal tumors: A clinicopathological analysis (Article)</title>
      <link>http://repub.eur.nl/res/pub/29876/</link>
      <pubDate>2008-07-01T00:00:00Z</pubDate>
      <description>Gastrointestinal stromal tumors (GIST) are the most common malignant mesenchymal tumors of the gastrointestinal tract. The principal treatment modality for primary GIST is surgery whereas for metastatic GIST, imatinib has an established role. In patients with locally advanced and metastatic GIST, the role of surgery in the imatinib era is still unclear. Fifteen patients with locally advanced (n≤9) and/or metastatic GIST (n≤6) were treated with imatinib followed by resection. Detailed histopathological examination was performed before and after treatment with imatinib, which was given for a median of 11 months before surgery. Ten patients showed a radiographic partial response, four patients had stable disease, and one patient progressed. At the time of surgery, the median tumor diameter was 6.5g cm. In all the nine patients with locally advanced GIST, a R0 resection could be performed. Histopathological examination showed imatinib effects in all tumors, including the case with progressive disease. All patients with locally advanced disease (n≤9) were alive after a median follow-up of 40 months (range: 18g-59), of which seven patients were free of disease. Four of the six patients treated for metastatic GIST died of disease after 30, 45, 50, and 74 months of follow-up. Remarkably, in five of six patients in whom CD117 expression was diminished or lost in the resection specimen, disease recurrence was observed. In patients with retained CD117 expression, one of the nine patients had recurrent disease. In conclusion, preoperative imatinib treatment in patients with locally advanced GIST resulted in a decrease of tumor load in most patients, enabling complete surgical resection. For patients with metastatic GIST, the role of surgery remains less clear. Loss or decrease of CD117 expression in the resected specimen after imatinib treatment may be associated with disease recurrence. </description>
    </item> <item>
      <title>Circulating endothelial cells in oncology: Pitfalls and promises (Article)</title>
      <link>http://repub.eur.nl/res/pub/29159/</link>
      <pubDate>2008-06-03T00:00:00Z</pubDate>
      <description>Adequate blood supply is a prerequisite in the pathogenesis of solid malignancies. As a result, depriving a tumour from its oxygen and nutrients, either by preventing the formation of new vessels, or by disrupting vessels already present in the tumour, appears to be an effective treatment modality in oncology. Given the mechanism by which these agents exert their anti-tumour activity together with the crucial role of tumour vasculature in the pathogenesis of tumours, there is a great need for markers properly reflecting its impact. Circulating endothelial cells (CEC), which are thought to derive from damaged vasculature, may be such a marker. Appropriate enumeration of these cells appears to be a technical challenge. Nevertheless, first studies using validated CEC assays have shown that CEC numbers in patients with advanced malignancies are elevated compared to healthy controls making CEC a potential tool for among other establishing prognosis and therapy-induced effects. In this review, we will address the possible clinical applications of CEC detection in oncology, as well as the pitfalls encountered in this process. </description>
    </item> <item>
      <title>Gene expression profiles associated with the presence of a fibrotic focus and the growth pattern in lymph node-negative breast cancer (Article)</title>
      <link>http://repub.eur.nl/res/pub/30204/</link>
      <pubDate>2008-05-15T00:00:00Z</pubDate>
      <description>Purpose: A fibrotic focus, the scar-like area found in the center of an invasive breast tumor, is a prognostic parameter associated with an expansive growth pattern, hypoxia, and (lymph) angiogenesis. Little is known about the molecular pathways involved. Experimental Design: Sixty-five patients were selected of whom microarray data of the tumor and H&amp;E slides for histologic analysis were available. The growth pattern and the presence and size of a fibrotic focus were assessed. Differences in biological pathways were identified with global testing. The correlations of growth pattern and fibrotic focus with common breast cancer signatures and with clinicopathologic variables and survival were investigated. Results: Tumors with a large fibrotic focus showed activation of Ras signaling and of the hypoxia-inducible factor-1 α pathway. Furthermore, unsupervised hierarchical cluster analysis with hypoxia- and (lymph) angiogenesis-related genes showed that hypoxia-inducible factor-1 α vascular endothelial growth factor A, and carbonic anhydrase 9 were overexpressed. The presence of a fibrotic focus, especially a large fibrotic focus, was associated with the basal-like subtype (P = 0.009), an activated wound-healing signature (P = 0.06), and a poor-prognosis 76-gene signature (P = 0.004). The presence of a fibrotic focus (P = 0.02) and especially of a large fibrotic focus (P = 0.004) was also associated with early development of distant metastasis. Conclusions: Our results sustain the hypothesis that hypoxia-driven angiogenesis is essential in the biology of a fibrotic focus. Ras and Akt might play a role as downstream modulators. Our data furthermore suggest that vascular endothelial growth factor A does not only drive angiogenesis but also lymphangiogenesis in tumors with a fibrotic focus. Our data also show an association between the presence of a fibrotic focus and infaust molecular signatures. </description>
    </item> <item>
      <title>Classifying thymomas (Article)</title>
      <link>http://repub.eur.nl/res/pub/29742/</link>
      <pubDate>2008-05-01T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>Brachyury expression in extra-axial skeletal and soft tissue chordomas: A marker that distinguishes chordoma from mixed tumor/myoepithelioma/parachordoma in soft tissue (Article)</title>
      <link>http://repub.eur.nl/res/pub/29384/</link>
      <pubDate>2008-04-01T00:00:00Z</pubDate>
      <description>Axial chordoma represents approximately 1% of malignant bone tumors. This tumor expresses cytokeratins, specifically cytokeratin 19, and commonly S100. More recently brachyury, a transcription factor important in mesodermal differentiation, including notochord development, has been detected by immunohistochemistry in axial chordomas and hemangioblastomas but not chondrosarcomas or other neoplasms. In this report, we describe 10 cases (6 men, 4 women: age 18 to 68 y; mean 44.6) of extra-axial tumors, 8 in bone and 2 in soft tissue, with morphologic and immunohistochemical features identical to those of axial chordoma. Imaging excluded metastases from axial chordoma. Three tumors occurred in the tibia, the others in the rib, metatarsal, ulna, femur, pubis: 2 intracortical, 6 intramedullary. Both soft tissue brachyury-positive tumors, one involving the thumb the other the wrist, were sited in the juxta-articular region. Seven of the tumors were widely excised and these patients are disease-free but of the 3 tumors that recurred, 1 was curetted, 1 was marginally excised, and 1 had a pathologic fracture on presentation. Metastases have not occurred in any of the patients. We also confirm the expression of brachyury in hemangioblastomas, and for the first time demonstrates its expression in spermatogonia and testicular germ cell tumors by immunohistochemistry. Brachyury was not detected in a wide range of tumors including carcinomas, lymphomas, and sarcomas. In conclusion, we describe the first series of extra-axial skeletal chordomas bringing the total number of such cases reported in the literature to 11, and present the first report of 2 soft tissue chordomas as defined by brachyury expression. </description>
    </item> <item>
      <title>Pseudomediastinal fibrosis caused by massive lymphadenopathy in domestically acquired particulate lung disease (Article)</title>
      <link>http://repub.eur.nl/res/pub/30126/</link>
      <pubDate>2008-04-01T00:00:00Z</pubDate>
      <description>In this report, we describe a case of domestically acquired particulate lung disease (DAPLD) or "hut lung" in a 59-year-old woman of Moroccan descent who emigrated to the Netherlands, having lived in an rural area for most her life. She presented with obstructive lung disease and with signs of mediastinal fibrosis which were shown to be caused by massive enlargement of mediastinal lymph nodes. To the best of our knowledge, this is the first case of DAPLD from Morocco and the first report of a case of DAPLD mimicking mediastinal fibrosis. </description>
    </item> <item>
      <title>Ischemia of the lung causes extensive long-term pulmonary injury: An experimental study (Article)</title>
      <link>http://repub.eur.nl/res/pub/30316/</link>
      <pubDate>2008-03-26T00:00:00Z</pubDate>
      <description>Background: Lung ischemia-reperfusion injury (LIRI) is suggested to be a major risk factor for development of primary acute graft failure (PAGF) following lung transplantation, although other factors have been found to interplay with LIRI. The question whether LIRI exclusively results in PAGF seems difficult to answer, which is partly due to the lack of a long-term experimental LIRI model, in which PAGF changes can be studied. In addition, the long-term effects of LIRI are unclear and a detailed description of the immunological changes over time after LIRI is missing. Therefore our purpose was to establish a long-term experimental model of LIRI, and to study the impact of LIRI on the development of PAGF, using a broad spectrum of LIRI parameters including leukocyte kinetics.Methods: Male Sprague-Dawley rats (n = 135) were subjected to 120 minutes of left lung warm ischemia or were sham-operated. A third group served as healthy controls. Animals were sacrificed 1, 3, 7, 30 or 90 days after surgery. Blood gas values, lung compliance, surfactant conversion, capillary permeability, and the presence of MMP-2 and MMP-9 in broncho-alveolar-lavage fluid (BALf) were determined. Infiltration of granulocytes, macrophages and lymphocyte subsets (CD45RA+, CD5+CD4+, CD5+CD8+) was measured by flowcytometry in BALf, lung parenchyma, thoracic lymph nodes and spleen. Histological analysis was performed on HE sections.Results: LIRI resulted in hypoxemia, impaired left lung compliance, increased capillary permeability, surfactant conversion, and an increase in MMP-2 and MMP-9. In the BALf, most granulocytes were found on day 1 and CD5+CD4+and CD5+CD8+-cells were elevated on day 3. Increased numbers of macrophages were found on days 1, 3, 7 and 90. Histology on day 1 showed diffuse alveolar damage, resulting in fibroproliferative changes up to 90 days after LIRI.Conclusion: The short-, and long-term changes after LIRI in this model are similar to the changes found in both PAGF and ARDS after clinical lung transplantation. LIRI seems an independent risk factor for the development of PAGF and resulted in progressive deterioration of lung function and architecture, leading to extensive immunopathological and functional abnormalities up to 3 months after reperfusion. </description>
    </item> <item>
      <title>CHEK2 1100delC and male breast cancer in the Netherlands (Article)</title>
      <link>http://repub.eur.nl/res/pub/15959/</link>
      <pubDate>2008-01-01T00:00:00Z</pubDate>
      <description>Mutations in the breast cancer susceptibility genes BRCA1, BRCA2, and CHEK2 are known risk factors for female breast cancer. Mutations in BRCA1 and BRCA2 also are associated with male breast cancer (MBC). Similarly, it had been suggested in the original CHEK2 identification report that the CHEK2 1100delC mutation confers an increased risk for MBC. Here, we have evaluated the risk of CHEK2 1100delC for MBC by genotyping CHEK2 1100delC in 23 familial and 71 unselected Dutch MBC cases. None of the 23 familial MBC cases carried the CHEK2 1100delC mutation. In contrast, CHEK2 1100delC was present in 3 of the 71 (4.2%) unselected MBC cases, which was significantly more prevalent than the 1.1% Dutch population frequency assessed in 1,692 individuals (P = 0.05, OR = 4.1, 95% CI 1.2-14.3). Our data suggest that, in the Netherlands, CHEK2 1100delC is associated with an increased risk for MBC.</description>
    </item> <item>
      <title>Prognosis of Primary Mucosal Penile Melanoma: A Series of 19 Dutch Patients and 47 Patients from the Literature (Article)</title>
      <link>http://repub.eur.nl/res/pub/35327/</link>
      <pubDate>2007-07-01T00:00:00Z</pubDate>
      <description>Objectives: To analyze the clinical features, prognostic factors, and survival of male patients with primary mucosal melanoma on the glans penis, meatus, fossa navicularis, and distal urethra. Methods: We analyzed the clinical features, prognostic factors, and survival of 66 male patients with primary mucosal melanoma on the glans penis, meatus, fossa navicularis, and distal urethra diagnosed over the past 25 years. Data from our series of 19 patients were combined with those of 47 patients reported in the literature. Results: The overall 2 and 5-year survival rates were 63% and 31%, respectively. All patients with nodal and/or distant metastases at presentation died within 2 years. Presence of ulceration, tumor depth of 3.5 mm or more, and tumor diameter greater than 15 mm had a significantly adverse effect on prognosis. Conclusions: The prognosis of primary mucosal penile melanoma is not worse than that for cutaneous melanoma with comparable tumor thickness. Treatment should be similar to that for cutaneous melanoma, with wide radical excision and sentinel node biopsy in clinically lymph node-negative patients. </description>
    </item> <item>
      <title>The incidence of parametrial tumor involvement in select patients with early cervix cancer is too low to justify parametrectomy (Article)</title>
      <link>http://repub.eur.nl/res/pub/35448/</link>
      <pubDate>2007-05-01T00:00:00Z</pubDate>
      <description>Objective.: To determine the incidence of parametrial involvement in a select group of patients with early cervical cancer. Methods.: We retrospectively reviewed the records of patients with cervical cancer and a maximum tumor diameter of 2 cm, infiltration depth &lt; 10 mm and negative pelvic lymph nodes who underwent a radical hysterectomy in two university hospitals. In addition, the literature was reviewed. Results.: 103 patients were identified in our databases that met the abovementioned criteria. In two of these patients (1.94%), parametrial involvement was found. Both patients had LVSI. Literature review revealed 696 patients described in three studies that satisfied the selection criteria. Three (0.43%) of these patients had parametrial involvement. In patients with early stage cervical carcinoma, tumor size &lt; 2 cm, infiltration depth &lt; 10 mm, negative pelvic lymph nodes and absent LVSI the risk of parametrial involvement is 0.63%. Conclusion.: Because of a very low risk on parametrial involvement, patients who fulfil strict selection criteria could be candidates for conization and pelvic lymphadenectomy instead of more extensive surgery. Morbidity and pregnancy complications may decrease while it is unlikely that survival will be compromised. </description>
    </item> <item>
      <title>Molecular analysis of human endometrium: Short-term tibolone signaling differs significantly from estrogen and estrogen + progestagen signaling (Article)</title>
      <link>http://repub.eur.nl/res/pub/36472/</link>
      <pubDate>2007-05-01T00:00:00Z</pubDate>
      <description>Tibolone, a tissue-selective compound with a combination of estrogenic, progestagenic, and androgenic properties, is used as an alternative for estrogen or estrogen plus progesterone hormone therapy for the treatment of symptoms associated with menopause and osteoporosis. The current study compares the endometrial gene expression profiles after short-term (21 days) treatment with tibolone to the profiles after treatment with estradiol-only (E2) and E2+ medroxyprogesterone acetate (E2+ MPA) in healthy postmenopausal women undergoing hysterectomy for endometrial prolapse. The impact of E2treatment on endometrial gene expression (799 genes) was much higher than the effect of tibolone (173 genes) or E2+ MPA treatment (174 genes). Furthermore, endometrial gene expression profiles after tibolone treatment show a weak similarity to the profiles after E2treatment (overlap 72 genes) and even less profile similarity to E2+ MPA treatment (overlap 17 genes). Interestingly, 95 tibolone-specific genes were identified. Translation of profile similarity into biological processes and pathways showed that ER-mediated downstream processes, such as cell cycle and cell proliferation, are not affected by E2 + MPA, slightly by tibolone, but are significantly affected by E2. In conclusion, tibolone treatment results in a tibolone-specific gene expression profile in the human endometrium, which shares only limited resemblance to E2and even less resemblance to E2 + MPA induced profiles. </description>
    </item> <item>
      <title>Giant myositis ossificans of the leg (Article)</title>
      <link>http://repub.eur.nl/res/pub/36675/</link>
      <pubDate>2007-04-01T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>Cells meeting our immunophenotypic criteria of endothelial cells are large platelets (Article)</title>
      <link>http://repub.eur.nl/res/pub/37044/</link>
      <pubDate>2007-03-15T00:00:00Z</pubDate>
      <description>Background: Circulating endothelial cells (CEC) are shed from damaged vasculature, making them a rational choice to serve as surrogate marker for vascular damage. Currently, various techniques and CEC definitions are in use, and their standardization and validation is needed. A flow cytometric single platform assay defining CEC as forward light scatter (FSC)low-to-intermedate, sideward light scatter (SSC)low, CD45-, CD31++and CD146+is a promising approach to enumerate CEC because of its simplicity (Mancuso et al., Blood 2001;97:3658-3661). Here, we set out to confirm the endothelial nature of these cells. Methods: We isolated cells with a FSClow-to-intermediate, SSClow, CD31++, CD45dimimmunophenotype (termed "cells meeting our immunophenotypic criteria for endothelial cells" [CMOIC]) from healthy donors to study the expression of endothelium-associated markers using several techniques. Special attention was paid to reagents identifying the endothelial cell-specific marker CD146. We compared antigen expression patterns of CMOIC with those of the HUVEC endothelial cell line and lymphocytes. Electron microscopy was used to detect the presence of endothelial cell-specific Weibel-Palade bodies in the sorted cells. Results: CD146 expression was negative on CMOIC for all tested CD146 mAbs, but positive on HUVEC cells and a minor subset of T lymphocytes. Using flow cytometry, we found no expression of any endothelium-associated marker except for CD31 and CD34. HUVEC cells were positive for all endothelial markers except for CD34. Evaluation of CMOIC morphology showed a homogenous population of cells with a highly irregular nucleus-like structure and positive endothelial immunohistochemistry. CMOIC contained neither nuclei nor DNA. Electron microscopy revealed the absence of a nucleus, the absence of endothelial specific Weibel-Palade bodies, and revealed CMOIC to be large platelets. Conclusion: The vast majority of cells with the immunophenotype FSClow-to-intermediate, SSClow, CD45-, CD31++do not express CD146 and are large platelets rather than endothelial cells. </description>
    </item> <item>
      <title>Extra-axial chordoma (Article)</title>
      <link>http://repub.eur.nl/res/pub/14897/</link>
      <pubDate>2006-09-01T00:00:00Z</pubDate>
      <description>A chordoma which occurs as a primary tumour outside the axial skeleton is known as an extra-axial chordoma, parachordoma or chordoma periphericum. It is extremely rare and therefore survival, recurrence and the rates of metastasis are not known. Whilst few recurrences have been described, the extra-axial chordoma has the potential for late recurrence at up to 12 years. Metastases are even less frequent. We report the case of a 56-year-old woman who developed an extra-axial chordoma of the right thoracic wall in close relationship with the tenth rib. The tumour was completely removed and the prognosis is excellent.</description>
    </item> <item>
      <title>Non-sentinel lymph node involvement in patients with breast cancer and sentinel node micrometastasis; too early to abandon axillary clearance (Article)</title>
      <link>http://repub.eur.nl/res/pub/8373/</link>
      <pubDate>2002-01-01T00:00:00Z</pubDate>
      <description>AIMS: It has been suggested that patients with T1-2 breast tumours and
      sentinel node (SLN) micrometastases, defined as foci of tumour cells
      smaller than 2 mm, may be spared completion axillary lymph node dissection
      because of the low incidence of further metastatic disease. To gain
      insight into the extent of non-sentinel lymph node (n-SLN) involvement,
      SLNs and complementary axillary clearance specimens in patients with SLN
      micrometastases were examined. METHODS: A set of 32 patients with SLN
      micrometastases was selected on the basis of pathology reports and review
      of SLNs. Five hundred and thirteen n-SLNs from the axillary clearance
      specimens were serially sectioned and analysed by means of
      immunohistochemistry for metastatic disease. Lymph node metastases were
      grouped as macrometastases (&gt; 2 mm), and micrometastases (&lt; 2 mm), and
      further subdivided as isolated tumour cells (ITCs) or clusters. RESULTS:
      In 11 of 32 patients, one or more n-SLN was involved. Grade 3 tumours and
      tumours &gt; 2 cm (T2-3 v T1) were significantly associated with n-SLN
      micrometastases as clusters (grade: odds ratio (OR), 8.3; 95% confidence
      interval (CI), 1.4 to 50.0; size: T2-3 tumours v T1: OR, 15; 95% CI, 2.18
      to 103.0). However, no subgroup of tumours with regard to size and grade
      was identified that did not have n-SLN metastases. CONCLUSIONS: In
      patients with breast cancer and SLN micrometastases, n-SLN involvement is
      relatively common. The incidence of metastatic clusters in n-SLN is
      greatly increased in patients with T2-3 tumours and grade 3 tumours.
      Therefore, axillary lymph node dissection is especially warranted in these
      patients. However, because n-SLN metastases also occur in T1 and low grade
      tumours, even these should be subjected to routine axillary dissection to
      achieve local control.</description>
    </item> <item>
      <title>Tissue distribution and functional aspects of the NF2 tumour suppressor gene (Doctoral Thesis)</title>
      <link>http://repub.eur.nl/res/pub/20082/</link>
      <pubDate>1999-12-15T00:00:00Z</pubDate>
      <description>Neoplastic disease in humans may occur sporadically, that is without a clear familial disposition, or
less commonly as an inherited disease. Several distinct familial cancer syndromes are known and the
underlying genetic cause has been identified of a number of these 46. The tumours in these syndromes
are usually phenotypically identical to their sporadically occurring counterparts. Both syndromes with
benign and with malignant tumours are known. In cancer syndromes tumours generally develop at a
younger age than those seen in the non-familial setting and are often multiple 101. Most inherited
cancer syndromes with an autosomal dominant inheritance pattern are caused by mutations in tumour
suppressor genes. Far fewer inherited cancer syndromes are caused by mutations in (proto-)oncogenes,
notably mUltiple endocrine neoplaSia type 2 and familial medullary thyroid cancer caused by
mutations in the RET gene 99, 107, hereditary papillary renal cell carcinoma caused by mutations in the
MET gene 124 and some cases of familial melanoma caused by mutations in the CDK4 gene 165. In
addition to the classical tumour suppressor genes and proto-oncogenes, other genes involved in
hereditary cancer are DNA repair genes.</description>
    </item> <item>
      <title>A G--&gt;A transition creates a branch point sequence and activation of a cryptic exon, resulting in the hereditary disorder neurofibromatosis 2 (Article)</title>
      <link>http://repub.eur.nl/res/pub/8773/</link>
      <pubDate>1998-01-01T00:00:00Z</pubDate>
      <description>We describe a G--&gt;A transition within intron 5 of the NF2 gene. This
          mutation creates a consensus splice branch point sequence. To our
          knowledge this is the first report of a mutation that creates a functional
          branch point sequence in a human hereditary disorder. The new branch point
          sequence is located 18 bp upstream of a consensus splice acceptor site. A
          consensus splice donor site is found 106 bp 3' of the acceptor site. Asa
          consequence the G--&gt;A transition results in an alternatively spliced mRNA
          containing an additional exon 5a of 106 bp derived from intron sequences.
          We cloned the mutant cDNA and show that due to an in-frame stop codon the
          cDNA codes for a truncated NF2 protein. The mutation was observed in three
          affected members of an NF2 family. In a tumour of one of the family
          members both alternatively spliced and wild-type mRNA were found, although
          the wild-type allele of the gene is absent due to an interstitial deletion
          on chromosome 22. We also show that immunoprecipitations reveal the
          presence of full-length wild-type NF2 protein in the tumour lysate. These
          data support the hypothesis that some degree of normal splicing of the
          mutant precursor RNA is taking place. It is therefore likely that this
          residual activity of the mutant allele explains the relatively mild
          phenotype in the family. These data also indicate that complete
          inactivation of the gene is not required for tumour formation.</description>
    </item>
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