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    <title>Löwenberg, B.</title>
    <link>http://repub.eur.nl/res/aut/1365/</link>
    <description>List of Publications</description>
    <language>en</language>
    <image>
      <url>http://repub.eur.nl/static-eur/img/logo.png</url>
      <title>RePub, Erasmus University Rotterdam</title>
      <link>http://repub.eur.nl</link>
    </image>
    <item>
      <title>Detection of mutant NPM1 mRNA in acute myeloid leukemia using custom gene expression arrays (Article)</title>
      <link>http://repub.eur.nl/res/pub/39859/</link>
      <pubDate>2013-04-01T00:00:00Z</pubDate>
      <description>Mutations in the gene encoding nucleophosmin (NPM1) carry a prognostic value for patients with acute myeloid leukemia (AML). Various techniques are currently being used to detect these mutations in routine molecular diagnostics. Incorporation of accurate NPM1 mutation detection on a gene expression platform would enable simultaneous detection with various other expression biomarkers. Here we present an array-based mutation detection using custom probes for NPM1 WT mRNA and NPM1 type A, B, and D mutant mRNA. This method was 100% accurate on a training cohort of 505 newly diagnosed unselected AML cases. Validation on an independent cohort of 143 normal-karyotype AML cases revealed no false-negative results, and one false positive (sensitivity 100.0% and specificity 98.7%). Based on this, we conclude that this method provides a reliable method for NPM1 mutation detection. The method can be applied to other genes/mutations as long as the mutant alleles are sufficiently highly expressed. </description>
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      <title>Identification of a 24-gene prognostic signature that improves the european LeukemiaNet risk classification of acute myeloid leukemia: An international collaborative study (Article)</title>
      <link>http://repub.eur.nl/res/pub/39905/</link>
      <pubDate>2013-03-20T00:00:00Z</pubDate>
      <description>Purpose: To identify a robust prognostic gene expression signature as an independent predictor of surviva of patients with acute myeloid leukemia (AML) and use it to improve established risk classification Patients and Methods: Four independent sets totaling 499 patients with AML carrying various cytogenetic and molecular abnormalities were used as training sets. Two independent patient sets composed of 825 patients were used as validation sets. Notably, patients from different sets were treated with different protocols, and their gene expression profiles were derived using different microarray platforms. Cox regression and Kaplan-Meier methods were used for survival analyses. Results: A prognostic signature composed of 24 genes was derived from a meta-analysis of Cox regression values of each gene across the four training sets. In multivariable models, a higher sum value of the 24-gene signature was an independent predictor of shorter overall (OS) and event-free surviva (EFS) in both training and validation sets (P &lt; .01). Moreover, this signature could substantially mprove the European LeukemiaNet (ELN) risk classification of AML, and patients in three new risk groups classified by the integrated risk classification showed significantly (P &lt; .001) distinct OS and EFS Conclusion: Despite different treatment protocols applied to patients and use of different microarray platforms for expression profiling, a common prognostic gene signature was identified as an independent predictor of survival of patients with AML. The integrated risk classification incorporating this gene signature provides a better framework for risk stratification and outcome prediction than the ELN classification. </description>
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      <title>Transition of highly specific microRNA expression patterns in association with discrete maturation stages of human granulopoiesis (Article)</title>
      <link>http://repub.eur.nl/res/pub/33248/</link>
      <pubDate>2011-11-01T00:00:00Z</pubDate>
      <description></description>
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      <title>Prognostic value of FLT3 mutations in patients with acute promyelocytic leukemia treated with all-trans retinoic acid and anthracycline monochemotherapy (Article)</title>
      <link>http://repub.eur.nl/res/pub/26795/</link>
      <pubDate>2011-10-01T00:00:00Z</pubDate>
      <description>Background Fms-like tyrosine kinase-3 (FLT3) gene mutations are frequent in acute promyelocytic leukemia but their prognostic value is not well established. Design and Methods We evaluated FLT3-internal tandem duplication and FLT3-D835 mutations in patients treated with all-trans retinoic acid and anthracycline-based chemotherapy enrolled in two subsequent trials of the Programa de Estudio y Tratamiento de las Hemopatías Malignas (PETHEMA) and Hemato-Oncologie voor Volwassenen Nederland (HOVON) groups between 1996 and 2005. Results FLT3-internal tandem duplication and FLT3-D835 mutation status was available for 306 (41%) and 213 (29%) patients, respectively. Sixty-eight (22%) and 20 (9%) patients had internal tandem duplication and D835 mutations, respectively. Internal tandem duplication was correlated with higher white blood cell and blast counts, lactate dehydrogenase, relapse-risk score, fever, hemorrhage, coagulopathy, BCR3 isoform, M3 variant subtype, and expression of CD2, CD34, human leukocyte antigen-DR, and CD11b surface antigens. The FLT3-D835 mutation was not significantly associated with any clinical or biological characteristic. Univariate analysis showed higher relapse and lower survival rates in patients with a FLT3-internal tandem duplication, while no impact was observed in relation to FLT3-D835. The prognostic value of the FLT3-internal tandem duplication was not retained in the multivariate analysis. Conclusions FLT3-internal tandem duplication mutations are associated with several hematologic features in acute promyelocytic leukemia, in particular with high white blood cell counts, but we were unable to demonstrate an independent prognostic value in patients with acute promyelocytic leukemia treated with all-trans retinoic acid and anthracycline-based regimens. </description>
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      <title>MiR-17/20/93/106 promote hematopoietic cell expansion by targeting sequestosome 1-regulated pathways in mice (Article)</title>
      <link>http://repub.eur.nl/res/pub/31277/</link>
      <pubDate>2011-07-28T00:00:00Z</pubDate>
      <description>MicroRNAs (miRNAs) are pivotal for regulation of hematopoiesis but their critical targets remain largely unknown. Here, we show that ectopic expression of miR-17, -20,-93 and -106, all AAAGUGC seed-containing miRNAs, increases proliferation, colony outgrowth and replating capacity of myeloid progenitors and results in enhanced P-ERK levels. We found that these miRNAs are endogenously and abundantly expressed in myeloid progenitors and down-regulated in mature neutrophils. Quantitative proteomics identified sequestosome 1 (SQSTM1), an ubiquitin-binding protein and regulator of autophagy-mediated protein degradation, as a major target for these miRNAs in myeloid progenitors. In addition, we found increased expression of Sqstm1 transcripts during CSF3-induced neutrophil differentiation of 32D-CSF3R cells and an inverse correlation of SQSTM1 protein levels and miR-106 expression in AML samples. ShRNA-mediated silencing of Sqstm1 phenocopied the effects of ectopic miR-17/20/93/106 expression in hematopoietic progenitors in vitro and in mice. Further, SQSTM1 binds to the ligand-activated colony-stimulating factor 3 receptor (CSF3R) mainly in the late endosomal compartment, but not in LC3 positive autophagosomes. SQSTM1 regulates CSF3R stability and ligand-induced mitogen-activated protein kinase signaling. We demonstrate that AAAGUGC seed-containing miRNAs promote cell expansion, replating capacity and signaling in hematopoietic cells by interference with SQSTM1-regulated pathways. </description>
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      <title>Risk stratification of intermediate-risk acute myeloid leukemia: Integrative analysis of a multitude of gene mutation and gene expression markers (Article)</title>
      <link>http://repub.eur.nl/res/pub/31289/</link>
      <pubDate>2011-07-28T00:00:00Z</pubDate>
      <description>Numerous molecular markers have been recently discovered as potential prognostic factors in acute myeloid leukemia (AML). It has become of critical importance to thoroughly evaluate their interrelationships and relative prognostic importance. Gene expression profiling was conducted in a well-characterized cohort of 439 AML patients (age &lt; 60 years) to determine expression levels of EVI1, WT1, BCL2, ABCB1, BAALC, FLT3, CD34, INDO, ERG and MN1. A variety of AML-specific mutations were evaluated, that is, FLT3, NPM1, N-RAS, K-RAS, IDH1, IDH2, and CEBPADM/SM(double/single). Univariable survival analysis shows that (1) patients with FLT3ITDmutations have inferior overall survival (OS) and event-free survival (EFS), whereas CEBPADMand NPM1 mutations indicate favorable OS and EFS in intermediate-risk AML, and (2) high transcript levels of BAALC, CD34, MN1, EVl1, and ERG predict inferior OS and EFS. In multivariable survival analysis, CD34, ERG, and CEBPADMremain significant. Using survival tree and regression methodologies, we show that CEBPADM, CD34, and IDH2 mutations are capable of separating the intermediate group into 2 AML subgroups with highly distinctive survival characteristics (OS at 60 months: 51.9% vs 14.9%). The integrated statistical approach demonstrates that from the multitude of biomarkers a greatly condensed subset can be selected for improved stratification of intermediate-risk AML. </description>
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      <title>Predictive impact of allele-matching and EBMT risk score for outcome after T-cell depleted unrelated donor transplantation in poor-risk acute leukemia and myelodysplasia (Article)</title>
      <link>http://repub.eur.nl/res/pub/26370/</link>
      <pubDate>2011-06-01T00:00:00Z</pubDate>
      <description>Many parameters predict for outcome after unrelated donor (URD) allogeneic hematopoietic stem cell transplantation (alloSCT). High-resolution HLA-matching significantly impacts outcome and also the European Group of Blood and Marrow Transplantation (EBMT) risk score, based on patient age, disease stage, donor type, time from diagnosis to SCT and gender combination, may predict for non-relapse mortality and overall survival (OS). We evaluated the individual and combined effects of allele-matching and the EBMT risk score in 327 patients with poor-risk acute leukemia or myelodysplasia, who received a T-cell depleted URD alloSCT. Matching for HLA-A, -B, -C and -DRB1 alleles (8/8 match) was associated with a 5-year OS of 40% compared with 30% for mismatched (≤7/8) pairs (P=0.02). Patients with EBMT risk scores of 1-2, 3, 4 and 5-7 had 5-year OS estimates of 53, 43, 30 and 20%, respectively (P&lt;0.001). The favorable prognostic impact of an 8/8 donor was most pronounced if the EBMT risk score was low (1-2). Five-year OS was 74±8% vs 39±11% for fully matched patients with a low-risk EBMT score as compared with EBMT low-risk patients with ≤7/8 donors. These data underscore the importance of incorporating both the EBMT risk score and the degree of high-resolution HLA-matching in the risk assessment prior to URD alloSCT.Leukemia advance online publication, 24 May 2011; doi:10.1038/leu.2011.123.</description>
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      <title>Integrative prognostic risk score in acute myeloid leukemia with normal karyotype (Article)</title>
      <link>http://repub.eur.nl/res/pub/26391/</link>
      <pubDate>2011-06-01T00:00:00Z</pubDate>
      <description>To integrate available clinical and molecular information for cytogenetically normal acute myeloid leukemia (CN-AML) patients into one risk score, 275 CN-AML patients from multicenter treatment trials AML SHG Hannover 0199 and 0295 and 131 patients from HOVON/SAKK protocols as external controls were evaluated for mutations/polymorphisms in NPM1, FLT3, CEBPA, MLL, NRAS, IDH1/2, and WT1. Transcript levels were quantified for BAALC, ERG, EVI1, ID1, MN1, PRAME, and WT1. Integrative prognostic risk score (IPRS) was modeled in 181 patients based on age, white blood cell count, mutation status of NPM1, FLT3-ITD, CEBPA, single nucleotide polymorphism rs16754, and expression levels of BAALC, ERG, MN1, and WT1 to represent low, intermediate, and high risk of death. Complete remission (P = .005), relapse-free survival (RFS, P &lt; .001), and overall survival (OS, P &lt; .001) were significantly different for the 3 risk groups. In 2 independent validation cohorts of 94 and 131 patients, the IPRS predicted different OS (P &lt; .001) and RFS (P &lt; .001). High-risk patients with related donors had longer OS (P = .016) and RFS (P = .026) compared with patients without related donors. In contrast, intermediate-risk group patients with related donors had shorter OS (P=.003) and RFS(P=.05). Donor availability had no impact on outcome of patients in the low-risk group. Thus, the IPRS may improve consolidation treatment stratification in CN-AML patients. Study registered at www.clinicaltrials.gov as #NCT00209833. </description>
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      <title>Acute myeloid leukemia with monosomal karyotype at the far end of the unfavorable prognostic spectrum (Article)</title>
      <link>http://repub.eur.nl/res/pub/23638/</link>
      <pubDate>2011-04-01T00:00:00Z</pubDate>
      <description>[Introduction] The treatment of acute myeloid leukemia (AML) is among the most dose-intensive approaches in clinical oncology and involves variable therapeutic options with highly diverse consequences in terms of toxicities and anti-leukemic effects. One illustrative example is the choice between consolidation chemotherapy and stem cell transplantation in first remission and also the choice among highly diverse types of stem cell transplantation such as autologous, allogeneic-sibling, haplo-identical, unrelated donor or umbilical cord blood  grafting.</description>
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      <title>Cytarabine dose for acute myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/25150/</link>
      <pubDate>2011-03-17T00:00:00Z</pubDate>
      <description>BACKGROUND: Cytarabine (ara-C) is an important drug in the treatment of acute myeloid leukemia (AML). High-dose cytarabine (2000 to 3000 mg per square meter of body-surface area) is toxic but results in higher rates of relapse-free survival than does the conventional dose of 100 to 400 mg per square meter. Intermediate dose levels have not been thoroughly evaluated. METHODS: We compared two induction regimens in patients 18 to 60 years of age (median, 49) who had newly diagnosed AML. The intermediate-dose group, totaling 431 patients, received cytarabine at a dose of 200 mg per square meter given by continuous intravenous infusion for 24 hours during cycle 1 of induction therapy and 1000 mg per square meter by infusion for 3 hours twice daily during cycle 2 of induction therapy. The high-dose group, totaling 429 patients, received a dose-escalated regimen of 1000 mg of cytarabine per square meter every 12 hours in cycle 1 and 2000 mg per square meter twice daily in cycle 2. Patients with a complete response did not receive additional cytarabine but received consolidation therapy in a third cycle of chemotherapy (mitoxantrone-etoposide) or underwent autologous or allogeneic stem-cell transplantation. Complete remission rates, survival rates, and toxic effects were assessed for each treatment group. RESULTS: At a median follow-up of 5 years, no significant differences were noted between the intermediate-dose group and the high-dose group with respect to complete remission rates (80% and 82%, respectively), probability of relapse, event-free survival at 5 years (34% and 35%), or overall survival (40% and 42%). High-dose cytarabine provided no clear advantage in any prognostic subgroup. The high-dose treatment resulted in higher incidences of grade 3 and grade 4 toxic effects (in cycle 1), prolonged hospitalization, and delayed neutrophil recovery (in cycle 2) and platelet recovery (in cycles 2 and 3). CONCLUSIONS: Induction therapy with cytarabine at the lower dose already produced maximal antileukemic effects for all response end points, suggesting a plateau in the dose-response relationship above this dose level. High-dose cytarabine results in excessive toxic effects without therapeutic benefit. (Netherlands Trial Register number, NTR230.). Copyright </description>
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      <title>Prognostic impact, concurrent genetic mutations, and gene expression features of AML with CEBPA mutations in a cohort of 1182 cytogenetically normal AML patients: Further evidence for CEBPA double mutant AML as a distinctive disease entity (Article)</title>
      <link>http://repub.eur.nl/res/pub/33529/</link>
      <pubDate>2011-02-24T00:00:00Z</pubDate>
      <description>We evaluated concurrent gene mutations, clinical outcome, and gene expression signatures of CCAAT/enhancer binding protein alpha (CEBPA) double mutations (CEBPAdm) versus single mutations (CEBPAsm) in 1182 cytogenetically normal acute myeloid leukemia (AML) patients (16-60 years of age). We identified 151 (12.8%) patients with CEBPA mutations (91 CEBPAdmand 60 CEBPAsm). The incidence of germline mutations was 7% (5 of 71), including 3 C-terminal mutations. CEBPAdmpatients had a lower frequency of concurrent mutations than CEBPAsmpatients (P &lt; .0001). Both, groups were associated with a favorable outcome compared with CEBPAwt(5-year overall survival [OS] 63% and 56% vs 39%; P &lt; .0001 and P = .05, respectively). However, in multivariable analysis only CEBPAdmwas a prognostic factor for favorable OS outcome (hazard ratio [HR] 0.36, P &lt; .0001; event-free survival, HR 0.41, P &lt; .0001; relapse-free survival, HR 0.55, P = .001). Outcome in CEBPAsmis dominated by concurrent NPM1 and/or FLT3 internal tandem duplication mutations. Unsupervised and supervised GEP analyses showed that CEBPAdmAML (n = 42), but not CEBPAsmAML (n = 18), expressed a unique gene signature. A 25-probe set prediction signature for CEBPAdmAML showed 100% sensitivity and specificity. Based on these findings, we propose that CEBPAdmshould be clearly defined from CEBPAsmAML and considered as a separate entity in the classification of AML. </description>
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      <title>Clinical significance of CD56 expression in patients with acute promyelocytic leukemia treated with all-trans retinoic acid and anthracycline-based regimens (Article)</title>
      <link>http://repub.eur.nl/res/pub/22849/</link>
      <pubDate>2011-02-10T00:00:00Z</pubDate>
      <description>The expression of CD56 antigen in acute promyelocytic leukemia (APL) blasts has been associated with short remission duration and extramedullary relapse. We investigated the clinical significance of CD56 expression in a large series of patients with APL treated with all-trans retinoic acid and anthracycline-based regimens. Between 1996 and 2009, 651 APL patients with available data on CD56 expression were included in 3 subsequent trials (PETHEMA LPA96 and LPA99 and PETHEMA/HOVON LPA2005). Seventytwo patients (11%) were CD56+ (expression of CD56 in ≥20% leukemic promyelocytes). CD56+ APL was significantly associated with high white blood cell counts; low albumin levels; BCR3 isoform; and the coexpression of CD2, CD34, CD7, HLA-DR, CD15, and CD117 antigens. For CD56+ APL, the 5-year relapse rate was 22%, compared with a 10% relapse rate for CD56- APL (P = .006). In the multivariate analysis, CD56 expression retained the statistical significance together with the relapse-risk score. CD56+ APLalso showed a greater risk of extramedullary relapse (P &lt; .001). In summary, CD56 expression is associated with the coexpression of immaturity-associated and T-cell antigens and is an independent adverse prognostic factor for relapse in patients with APL treated with all-trans-retinoic acid plus idarubicin - derived regimens. This marker may be considered for implementing riskadapted therapeutic strategies in APL. The LPA2005 trial is registered at http://www.clinicaltrials.gov as NCT00408278.</description>
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      <title>Therapeutic advances in acute myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/23885/</link>
      <pubDate>2011-02-10T00:00:00Z</pubDate>
      <description>The choice of treatment approach and outcome in acute myeloid leukemia (AML) depends on the age of the patient. In younger patients, arbitrarily defined as being younger than 60 years, 70% to 80% enter complete disease remission with several anthracycline-based chemotherapy combinations. Consolidation with high-dose cytarabine or stem-cell transplantation in high-risk patients will restrict overall relapse to approximately 50%. A number of demographic features can predict the outcome of treatment including cytogenetics and an increasing list of molecular features (ie, FLT3, NPM1, MLL, WT1, CEBPalpha, EVI1). These are increasingly being used to direct postinduction therapy, but they are also molecular targets for a new generation of small molecule inhibitors that are in early development; however, randomized data have yet to emerge. In older patients who comprise the majority, which will increase with demographic change, the initial clinical decision to be made is whether the patient should receive an intensive or nonintensive approach. If the same anthracycline/cytarabine-based approach is deployed, the remission rate will be around 50%, but the risk of subsequent relapse is approximately 85% at 3 years. This difference from younger patients is explained partly by the ability of patients to tolerate effective therapy, and also the aggregation of several poor risk factors compared with the young. There remains a substantial proportion of patients older than 60 years who do not receive intensive chemotherapy. Their survival is approximately 4 months, but there is considerable interest in developing new treatments for this patient group, including novel nucleoside analogs and several other agents. </description>
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      <title>Aberrant DNA hypermethylation signature in acute myeloid leukemia directed by EVI1 (Article)</title>
      <link>http://repub.eur.nl/res/pub/33546/</link>
      <pubDate>2011-01-06T00:00:00Z</pubDate>
      <description>DNA methylation patterns are frequently dysregulated in cancer, although little is known of the mechanisms through which specific gene sets become aberrantly methylated. The ecotropic viral integration site 1 (EVI1) locus encodes a DNA binding zinc-finger transcription factor that is aberrantly expressed in a subset of acute myeloid leukemia (AML) patients with poor outcome. We find that the promoter DNA methylation signature of EVI1 AML blast cells differs from those of normal CD34+bone marrow cells and other AMLs. This signature contained 294 differentially methylated genes, of which 238 (81%) were coordinately hypermethylated. An unbiased motif analysis revealed an overrepresentation of EVI1 binding sites among these aberrantly hypermethylated loci. EVI1 was capable of binding to these promoters in 2 different EVI1-expressing cell lines, whereas no binding was observed in an EVI1-negative cell line. Furthermore, EVI1 was observed to interact with DNA methyl transferases 3A and 3B. Among the EVI1 AML cases, 2 subgroups were recognized, of which 1 contained AMLs with many more methylated genes, which was associated with significantly higher levels of EVI1 than in the cases of the other subgroup. Our data point to a role for EVI1 in directing aberrant promoter DNA methylation patterning in EVI1 AMLs. </description>
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      <title>Leukemic IDH1 and IDH2 Mutations Result in a Hypermethylation Phenotype, Disrupt TET2 Function, and Impair Hematopoietic Differentiation (Article)</title>
      <link>http://repub.eur.nl/res/pub/21880/</link>
      <pubDate>2010-12-14T00:00:00Z</pubDate>
      <description>Cancer-associated IDH mutations are characterized by neomorphic enzyme activity and resultant 2-hydroxyglutarate (2HG) production. Mutational and epigenetic profiling of a large acute myeloid leukemia (AML) patient cohort revealed that IDH1/2-mutant AMLs display global DNA hypermethylation and a specific hypermethylation signature. Furthermore, expression of 2HG-producing IDH alleles in cells induced global DNA hypermethylation. In the AML cohort, IDH1/2 mutations were mutually exclusive with mutations in the α-ketoglutarate-dependent enzyme TET2, and TET2 loss-of-function mutations were associated with similar epigenetic defects as IDH1/2 mutants. Consistent with these genetic and epigenetic data, expression of IDH mutants impaired TET2 catalytic function in cells. Finally, either expression of mutant IDH1/2 or Tet2 depletion impaired hematopoietic differentiation and increased stem/progenitor cell marker expression, suggesting a shared proleukemogenic effect.</description>
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      <title>Evidence for acute neurotoxicity after chemotherapy (Article)</title>
      <link>http://repub.eur.nl/res/pub/27898/</link>
      <pubDate>2010-12-01T00:00:00Z</pubDate>
      <description>Objective: Chronic neurotoxicity is a recognized long-term complication following chemotherapy in a range of diseases. Neurotoxicity adversely affects patients' quality of life. The objective of this study is to examine whether there is evidence of acute neurotoxicity. Methods This prospective study included patients with secondary progressive multiple sclerosis (SPMS-BMT, n = 14) and hematological malignancies (HM-BMT, n = 17) receiving chemotherapy as preconditioning for bone marrow transplant. The control groups included SPMS patients matched for demographic and clinical data (SPMS-PL, n = 14) and healthy controls (n = 14). Neurodegeneration was assessed at baseline and longitudinally (months 1, 2, 3, 6, 9, 12, 24, and 36), combining a clinical scale for disability (Expanded Disability Status Scale [EDSS]), a serum protein biomarker for neurodegeneration (neurofilaments, NfH-SMI35), and brain atrophy measures (magnetic resonance imaging). Results Disability progression was significantly more acute and severe following chemotherapy compared to placebo. Immediately after starting chemotherapy, serum NfH-SMI35 levels increased in 79% (p &lt; 0.0001) of SPMS-BMT patients and 41% (p &lt; 0.01) of HM-BMT patients compared to 0% of SPMS-PL patients or healthy controls. In SPMS-BMT serum NfH-SMI35 levels were &gt; 100-fold higher 1 month after chemotherapy (29.73ng/ml) compared to baseline (0.28ng/ml, p &lt; 0.0001). High serum NfH-SMI35 levels persisting for at least 3 months were associated with sustained disability progression on the EDSS (p &lt; 0.05). Brain atrophy rates increased acutely in SPMS-BMT (-2.09) compared to SPMS-PL (-1.18, p &lt; 0.05). Interpretation Neurotoxicity is an unwanted acute side effect of aggressive chemotherapy. Copyright </description>
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      <title>Phase I/II clinical study of Tosedostat, an inhibitor of aminopeptidases, in patients with acute myeloid leukemia and myelodysplasia. (Article)</title>
      <link>http://repub.eur.nl/res/pub/21690/</link>
      <pubDate>2010-10-01T00:00:00Z</pubDate>
      <description>PURPOSE: To identify the maximum-tolerated dose (MTD) and to evaluate the antileukemic activity of tosedostat (formerly CHR-2797), an orally bioavailable aminopeptidase inhibitor. PATIENTS AND METHODS: In phase I, the MTD of once daily oral doses of tosedostat in hematologic malignancies was defined. In phase II, the therapeutic activity of the maximum-acceptable dose (MAD) of tosedostat was evaluated in elderly and/or relapsing patients with acute myeloid leukemia (AML) or myelodysplastic syndrome. RESULTS: In phase I, 16 patients were treated in four cohorts with tosedostat (60 mg to 180 mg) for 28 days. Three patients reported dose-limiting toxicities: two with reversible thrombocytopenia (&gt; 75% reduction in platelet count) at 180 mg (MTD) and one with a Common Toxicity Criteria (CTC) grade 3 ALT elevation at 130 mg (MAD). In phase II, 41 patients were treated with 130 mg tosedostat. In phases I and II, the most common severe (CTC grades 3 to 5) adverse event was a reduction in the platelet count. Of the 51 AML patients in this study, seven reached complete marrow response (&lt; 5% marrow blasts), with three achieving complete remission, and a further seven patients reaching a partial marrow response (between 5% and 15% marrow blasts). The overall response rate was therefore 27%. All responders were age &gt; 60 years, and 79% had either relapsed or refractory AML. CONCLUSION: This phase I/II study demonstrates that oral once daily dosing with 130 mg tosedostat is well tolerated and has significant antileukemic activity. The favorable risk-benefit profile suggests that further clinical trials are warranted.</description>
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      <title>The impact of CD4+Foxp3+ Treg on immunity to murine cytomegalovirus after bone marrow transplantation depends on the peripheral or thymic source of T cell regeneration (Article)</title>
      <link>http://repub.eur.nl/res/pub/21839/</link>
      <pubDate>2010-10-01T00:00:00Z</pubDate>
      <description>Objective: The adoptive transfer of regulatory T cells (Treg) in murine models has been shown to ameliorate graft-versus-host disease while it may preserve the graft-versus-leukemia effect. However, the impact of Treg on infectious immunity after bone marrow transplantation (BMT) is still unclear. Immunocompetence against opportunistic viral infections depends on the kinetics of T cell recovery after BMT through two distinctive processes, i.e. lymphopenia-induced proliferation (LIP) of mature T cells and generation of T cells through thymopoiesis. Methods: In this study, we set out to assess the effects of adoptively transferred Treg on T cell regeneration in a homeostatic peripheral T cell expansion model and a thymopoiesis-dependent BMT model, and on murine cytomegalovirus (mCMV) clearance and mortality following mCMV challenge. Results: Using lymphopenic Rag-2-/-γc-/-  mice that received a limited number of congenic T cells, we demonstrate that adoptively transferred Treg abrogate LIP of T cells. mCMV challenge resulted in a rapid increase of viral load and death in mice that received Treg, but not in controls. In contrast, following syngeneic T cell-depleted BMT in Rag-2-/-γc-/- mice, adoptively transferred Treg did not delay T cell reconstitution nor suppressed thymic output and had no effect on viral clearance and survival following mCMV-challenge. Conclusion: The effect of Treg on T cell-mediated immunocompetence against mCMV early after BMT depends on the relative contribution of peripheral expansion and thymopoiesis to T cell regeneration.</description>
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      <title>Acquired mutations in the genes encoding IDH1 and IDH2 both are recurrent aberrations in acute myeloid leukemia: Prevalence and prognostic value (Article)</title>
      <link>http://repub.eur.nl/res/pub/26798/</link>
      <pubDate>2010-09-23T00:00:00Z</pubDate>
      <description>Somatic mutations in isocitrate dehydrogenase 1 and 2 (IDH1 and IDH2) were recently demonstrated in acute myeloid leukemia (AML), but their prevalence and prognostic impact remain to be explored in large extensively characterized AML series, and also in various other hematologic malignancies. Here, we demonstrate in 893 newly diagnosed cases of AML mutations in the IDH1 (6%) and IDH2 (11%) genes. Moreover, we identified IDH mutations in 2 JAK2 V617F myeloproliferative neoplasias (n = 96), a single case of acute lymphoblastic leukemia (n = 96), and none in chronic myeloid leukemias (n = 81). In AML, IDH1 and IDH2 mutations are more common among AML with normal karyotype and NPM1mutantgenotypes. IDH1 mutation status is an unfavorable prognostic factor as regards survival in a composite genotypic subset lacking FLT3ITDand NPM1mutant. Thus, IDH1 and IDH2 mutations are common genetic aberrations in AML, and IDH1 mutations may carry prognostic value in distinct subtypes of AML. </description>
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      <title>High VEGFC expression is associated with unique gene expression profiles and predicts adverse prognosis in pediatric and adult acute myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/26800/</link>
      <pubDate>2010-09-09T00:00:00Z</pubDate>
      <description>High VEGFC mRNA expression of acute myeloid leukemia (AML) blasts is related to increased in vitro and in vivo drug resistance. Prognostic significance of VEGFC on long-term outcome and its associated gene expression profiles remain to be defined. We studied effect of VEGFC on treatment outcome and investigated gene expression profiles associated with VEGFC using microarray data of 525 adult and 100 pediatric patients with AML. High VEGFC expression appeared strongly associated with reduced complete remission rate (P = .004), reduced overall and event-free survival (OS and EFS) in adult AML (P = .002 and P &lt; .001, respectively). Multivariable analysis established high VEGFC as prognostic indicator independent of cytogenetic risk, FLT3-ITD, NPM1, CEBPA, age, and white blood cell count (P = .038 for OS; P = .006 for EFS). Also, in pediatric AML high VEGFC was related to reduced OS (P = .041). A unique series of differentially expressed genes was identified that distinguished AML with high VEGFC from AML with low VEGFC, that is, 331 upregulated genes (representative of proliferation, vascular endothelial growth factor receptor activity, signal transduction) and 44 down-regulated genes (eg, related to apoptosis) consistent with a role in enhanced chemoresistance. In conclusion, high VEGFC predicts adverse longterm prognosis and provides prognostic information in addition to well-known prognostic factors. </description>
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      <title>Risk-adapted treatment of acute promyelocytic leukemia based on all-trans retinoic acid and anthracycline with addition of cytarabine in consolidation therapy for high-risk patients: Further improvements in treatment outcome (Article)</title>
      <link>http://repub.eur.nl/res/pub/26804/</link>
      <pubDate>2010-06-24T00:00:00Z</pubDate>
      <description>A risk-adapted strategy based on all-trans retinoic acid (ATRA) and anthracycline monochemotherapy (PETHEMALPA99 trial) has demonstrated a high antileukemic efficacy in acute promyelocytic leukemia. We designed a new trial (LPA2005) with the objective of achieving stepwise improvements in outcome. Between July 2005 and April 2009, low- and intermediate-risk patients (leukocytes &lt; 10 × 109/L) received a reduced dose of mitoxantrone for the second consolidation course, whereas high-risk patients younger than 60 years of age received cytarabine combined with ATRA and idarubicin in the first and third consolidation courses. Of 372 patients attaining complete remission afterATRAplus idarubicin (92.5%), 368 proceeded to consolidation therapy. For low- and intermediate-risk patients, duration of neutropenia and thrombocytopenia and hospital stay were significantly reduced without sacrificing antileukemic efficacy, compared with the previous LPA99 trial. For high-risk patients, the 3-year relapse rate was significantly lower in the LPA2005 trial (11%) than in theLPA99 (26%;P = .03). Overall disease-free survival was also better in the LPA2005 trial (P = .04). In conclusion, the lower dose of mitoxantrone resulted in a significant reduction of toxicity and hospital stay while maintaining the antileukemic activity, and the combination of ATRA, idarubicin, and cytarabine for high-risk acute promyelocytic leukemia significantly reduced the relapse rate in this setting. Registered at http://www.clinicaltrials.gov as NCT00408278. </description>
    </item> <item>
      <title>Efficacy of escalated imatinib combined with cytarabine in newly diagnosed patients with chronic myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/23659/</link>
      <pubDate>2010-06-01T00:00:00Z</pubDate>
      <description>Abstract.
BACKGROUND: In order to improve the molecular response rate and prevent resistance to treatment, combination therapy with different dosages of imatinib and cytarabine was studied in newly diagnosed patients with chronic myeloid leukemia in the HOVON-51 study.
DESIGN AND METHODS: Having reported feasibility previously, we hereby report the efficacy of escalated imatinib (200 mg, 400 mg, 600 mg or 800 mg) in combination with two cycles of intravenous cytarabine (200 mg/m(2) or 1000 mg/m(2) days 1 to 7) in 162 patients with chronic myeloid leukemia.
RESULTS: With a median follow-up of 55 months, the 5-year cumulative incidences of complete cytogenetic response, major molecular response, and complete molecular response were 89%, 71%, and 53%, respectively. A higher Sokal risk score was inversely associated with complete cytogenetic response (hazard ratio of 0.63; 95% confidence interval, 0.50-0.79, P&lt;0.001). A higher dose of imatinib and a higher dose of cytarabine were associated with increased complete molecular response with hazard ratios of 1.60 (95% confidence interval, 0.96-2.68, P=0.07) and 1.66 (95% confidence interval, 1.02-2.72, P=0.04), respectively. Progression-free survival and overall survival rates at 5 years were 92% and 96%, respectively. Achieving a major molecular response at 1 year was associated with complete absence of progression and a probability of achieving a complete molecular response of 89%.
CONCLUSIONS: The addition of intravenous cytarabine to imatinib as upfront therapy for patients with chronic myeloid leukemia is associated with a high rate of complete molecular responses (Clinicaltrials.Gov Identifier: NCT00028847).</description>
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      <title>Gemtuzumab ozogamicin as postremission treatment inAMLat 60 years of age or more: results of a multicenter phase 3 study (Article)</title>
      <link>http://repub.eur.nl/res/pub/23647/</link>
      <pubDate>2010-04-01T00:00:00Z</pubDate>
      <description>Abstract: In older patients with acute myeloid leukemia (AML), the prevention of relapse has remained one of the major therapeutic challenges, with more than 75% relapses after complete remission. The anti-CD33 immunotoxin conjugate gemtuzumab ozogamicin (GO) has shown antileukemic remission induction activity in patients with relapsed AML. Patients with AML or refractory anemia with excess blasts in first complete remission attained after intensive induction chemotherapy were randomized between 3 cycles of GO (6 mg/m(2) every 4 weeks) or no postremission therapy (control) to assess whether GO would improve outcome. The 2 treatment groups (113 patients receiving GO vs 119 control patients) were comparable with regard to age (60-78 years, median 67 years), performance status, and cytogenetics. A total of 110 of 113 received at least 1 cycle of GO, and 65 of 113 patients completed the 3 cycles. Premature discontinuation was mainly attributable to incomplete hematologic recovery or intercurrent relapse. Median time to recovery of platelets 50 x 10(9)/L and neutrophils 0.5 x 10(9)/L after GO was 14 days and 20 days. Nonhematologic toxicities were mild overall, but there was 1 toxic death caused by liver failure. There were no significant differences between both treatment groups with regard to relapse probabilities, nonrelapse mortality, overall survival, or disease-free survival (17% vs 16% at 5 years). Postremission treatment with GO in older AML patients does not provide benefits regarding any clinical end points. The HOVON-43 study is registered at The Netherlands Trial Registry (number NTR212) and at http://www.controlled-trials.com as ISRCTN77039377.</description>
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      <title>A variant allele of Growth Factor Independence 1 (GFI1) is associated with acute myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/23658/</link>
      <pubDate>2010-03-01T00:00:00Z</pubDate>
      <description>The GFI1 gene encodes a transcriptional repressor, which regulates myeloid differentiation. In the mouse, Gfi1 deficiency causes neutropenia and an accumulation of granulomonocytic precursor cells that is reminiscent of a myelodysplastic syndrome. We report here that a variant allele of GFI1 (GFI136N) is associated with acute myeloid leukemia (AML) in white subjects with an odds ratio of 1.6 (P &lt; 8 × 10−5). The GFI136N variant occurred in 1806 AML patients with an allele frequency of 0.055 compared with 0.035 in 1691 healthy control patients in 2 independent cohorts. We observed that both GFI1 variants maintain the same activity as transcriptional repressors but differ in their regulation by the AML1/ETO (RUNX1/RUNX1T1) fusion protein produced in AML patients with a t(8;21) translocation. AML1/ETO interacts and colocalizes with the more common GFI136S form in the nucleus and inhibits its repressor activity. However, the variant GFI136N protein has a different subnuclear localization than GFI136S. As a consequence, AML1/ETO does not colocalize with GFI136N and is unable to inhibit its repressor activity. We conclude that both variants of GFI1 differ in their ability to be regulated by interacting proteins and that the GFI136N variant form exhibits distinct biochemical features that may confer a predisposition to AML.</description>
    </item> <item>
      <title>Additional chromosome abnormalities in patients with acute promyelocytic leukemia treated with all-trans retinoic acid and chemotherapy (Article)</title>
      <link>http://repub.eur.nl/res/pub/26805/</link>
      <pubDate>2010-03-01T00:00:00Z</pubDate>
      <description>Background: Acute promyelocytic leukemia is a subtype of acute myeloid leukemia characterized by the t(15;17). The incidence and prognostic significance of additional chromosomal abnormalities in acute promyelocytic leukemia is still a controversial matter. Design and Methods: Based on cytogenetic data available for 495 patients with acute promyelocytic leukemia enrolled in two consecutive PETHEMA trials (LPA96 and LPA99), we analyzed the incidence, characteristics, and outcome of patients with acute promyelocytic leukemia with and without additional chromosomal abnormalities who had been treated with all-trans retinoic acid plus anthracycline monochemotherapy for induction and consolidation. Results: Additional chromosomal abnormalities were observed in 140 patients (28%). Trisomy 8 was the most frequent abnormality (36%), followed by abn(7q) (5%). Patients with additional chromosomal abnormalities more frequently had coagulopathy (P=0.03), lower platelet counts (P=0.02), and higher relapse-risk scores (P=0.02) than their counterparts without additional abnormalities. No significant association with FLT3/ITD or other clinicopathological characteristics was demonstrated. Patients with and without additional chromosomal abnormalities had similar complete remission rates (90% and 91%, respectively). Univariate analysis showed that additional chromosomal abnormalities were associated with a lower relapse-free survival in the LPA99 trial (P=0.04), but not in the LPA96 trial. However, neither additional chromosomal abnormalities overall nor any specific abnormality was identified as an independent risk factor for relapse in multivariate analysis. Conclusions: The lack of independent prognostic value of additional chromosomal abnormalities in acute promyelocytic leukemia does not support the use of alternative therapeutic strategies when such abnormalities are found. </description>
    </item> <item>
      <title>Mutant Wilms tumor 1 (WT1) mRNA with premature termination codons in acute myeloid leukemia (AML) is sensitive to nonsense-mediated RNA decay (NMD) (Article)</title>
      <link>http://repub.eur.nl/res/pub/28075/</link>
      <pubDate>2010-03-01T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>Diagnosis and management of acute myeloid leukemia in adults: Recommendations from an international expert panel, on behalf of the European LeukemiaNet (Article)</title>
      <link>http://repub.eur.nl/res/pub/26807/</link>
      <pubDate>2010-01-21T00:00:00Z</pubDate>
      <description>In 2003, an international working group last reported on recommendations for diagnosis, response assessment, and treatment outcomes in acute myeloid leukemia (AML). Since that time, considerable progress has been made in elucidating the molecular pathogenesis of the disease that has resulted in the identification of new diagnostic and prognostic markers. Furthermore, therapies are now being developed that target diseaseassociated molecular defects. Recent developments prompted an international expert panel to provide updated evidenceand expert opinion-based recommendations for the diagnosis and management of AML, that contain both minimal requirements for general practice as well as standards for clinical trials. A new standardized reporting system for correlation of cytogenetic and molecular genetic data with clinical data is proposed. </description>
    </item> <item>
      <title>DNA Methylation Signatures Identify Biologically Distinct Subtypes in Acute Myeloid Leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/23639/</link>
      <pubDate>2010-01-19T00:00:00Z</pubDate>
      <description>Abstract:  We hypothesized that DNA methylation distributes into specific patterns in cancer cells, which reflect critical biological differences. We therefore examined the methylation profiles of 344 patients with acute myeloid leukemia (AML). Clustering of these patients by methylation data segregated patients into 16 groups. Five of these groups defined new AML subtypes that shared no other known feature. In addition, DNA methylation profiles segregated patients with CEBPA aberrations from other subtypes of leukemia, defined four epigenetically distinct forms of AML with NPM1 mutations, and showed that established AML1-ETO, CBFb-MYH11, and PML-RARA leukemia entities are associated with specific methylation profiles. We report a 15 gene methylation classifier predictive of overall survival in an independent patient cohort (p &lt; 0.001, adjusted for known covariates).</description>
    </item> <item>
      <title>AML at older age: Age-related gene expression profiles reveal a paradoxical down-regulation of p16INK4A mRNA with prognostic significance (Article)</title>
      <link>http://repub.eur.nl/res/pub/25329/</link>
      <pubDate>2009-11-19T00:00:00Z</pubDate>
      <description>Acute myeloid leukemia (AML) has a different clinical and biologic behavior in patients at older age. To gain further insight into the molecular differences, we examined a cohort of 525 adults to compare gene expression profiles of the one-third of youngest cases (n = 175; median age 31 years) with the one-third of oldest cases (n = 175; median age 59 years). This analysis revealed that 477 probe sets were up-regulated and 492 probe sets were down-regulated with increasing age at the significance level of P &lt; .00001. After validation with 2 independent AML cohorts, the 969 differentially regulated probe sets on aging could be pointed to 41 probe sets, including the tumor-suppressor gene CDKN2A (encoding p16INK4A). In contrast to the induced p16INK4Aexpression that is associated with physiologic aging, p16INK4Ais down-regulated in AML samples of patients with increasing age. However, this was only noticed in the intermediate- and unfavorable-risk group and not in the favorable-risk group and the molecularly defined subset "NPM1 mutant without FLT3-ITD." Multivariate analysis revealed p16INK4A, besides cytogenetic risk groups, as an independent prognostic parameter for overall survival in older patients. We conclude that, in addition to altered clinical and biologic characteristics, AML presenting at older age shows different gene expression profiles. </description>
    </item> <item>
      <title>Modeling the functional heterogeneity of leukemia stem cells: Role of STAT5 in leukemia stem cell self-renewal (Article)</title>
      <link>http://repub.eur.nl/res/pub/25331/</link>
      <pubDate>2009-11-05T00:00:00Z</pubDate>
      <description>Although the cancer stem cell (CSC) concept implies that CSCs are rare, recent reports suggest that CSCs may be frequent in some cancers. We hypothesized that the proportion of leukemia stem cells would vary as a function of the number of dysregulated pathways. Constitutive expression of MN1 served as a 1-oncogene model, and coexpression of MN1 and a HOX gene served as a 2-oncogene model. Leukemia-initiating cell (LIC) number and in vitro expansion potential of LICs were functionally assessed by limiting dilution analyses. LIC expansion potential was 132-fold increased in the 2- compared with the 1-oncogene model, although phenotypically, both leukemias were similar. The 2-oncogene model was characterized by granulocyte-macrophage colony-stimulating factor (GM-CSF) hypersensitivity and activated STAT/ERK signaling. GM-CSF hypersensitivity of the 2-oncogene model (MN1/HOXA9) was lost in Stat5b-/-cells, and the LIC expansion potential was reduced by 86- and 28-fold in Stat5b-/-and Stat1-/-cells, respectively. Interestingly, in 201 acute myeloid leukemia (AML) patients, coexpression of MN1 and HOXA9 was restricted to patients with the poorest prognosis and was associated with highly active STAT signaling. Our data demonstrate the functional heterogeneity of LICs and show that STAT signaling is critical for leukemia stem cell self-renewal in MN1- and HOXA9-expressing leukemias. </description>
    </item> <item>
      <title>High-dose daunorubicin in older patients with acute myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/26809/</link>
      <pubDate>2009-09-24T00:00:00Z</pubDate>
      <description>BACKGROUND: A complete remission is essential for prolonging survival in patients with acute myeloid leukemia (AML). Daunorubicin is a cornerstone of the induction regimen, but the optimal dose is unknown. In older patients, it is usual to give daunorubicin at a dose of 45 to 50 mg per square meter of body-surface area. METHODS: Patients in whom AML or high-risk refractory anemia had been newly diagnosed and who were 60 to 83 years of age (median, 67) were randomly assigned to receive cytarabine, at a dose of 200 mg per square meter by continuous infusion for 7 days, plus daunorubicin for 3 days, either at the conventional dose of 45 mg per square meter (411 patients) or at an escalated dose of 90 mg per square meter (402 patients); this treatment was followed by a second cycle of cytarabine at a dose of 1000 mg per square meter for 6 days. The primary end point was event-free survival. RESULTS: The complete remission rates were 64% in the group that received the escalated dose of daunorubicin and 54% in the group that received the conventional dose (P = 0.002); the rates of remission after the first cycle of induction treatment were 52% and 35%, respectively (P&lt;0.001). There was no significant difference between the two groups in the incidence of hematologic toxic effects, 30-day mortality (11% and 12% in the two groups, respectively), or the incidence of moderate, severe, or life-threatening adverse events (P = 0.08). Survival end points in the two groups did not differ significantly overall, but patients in the escalated-treatment group who were 60 to 65 years of age, as compared with the patients in the same age group who received the conventional dose, had higher rates of complete remission (73% vs. 51%), event-free survival (29% vs. 14%), and overall survival (38% vs. 23%). CONCLUSIONS: In patients with AML who are older than 60 years of age, escalation of the dose of daunorubicin to twice the conventional dose, with the entire dose administered in the first induction cycle, effects a more rapid response and a higher response rate than does the conventional dose, without additional toxic effects. (Current Controlled Trials number, ISRCTN77039377; and Netherlands National Trial Register number, NTR212.) Copyright </description>
    </item> <item>
      <title>Central nervous system involvement at first relapse in patients with acute promyelocytic leukemia treated with all-trans retinoic acid and anthracycline monochemotherapy without intrathecal prophylaxis (Article)</title>
      <link>http://repub.eur.nl/res/pub/17576/</link>
      <pubDate>2009-09-01T00:00:00Z</pubDate>
      <description>Background: The prevalence of and risk factors for central nervous system recurrence in patients with acute promyelocytic leukemia are not well established and remain a controversial matter. Design and Methods: Between 1996 and 2005, 739 patients with newly diagnosed acute promyelocytic leukemia enrolled in two consecutive trials (PETHEMA LPA96 and LPA99) received induction therapy with all-trans retinoic acid and idarubicin. Consolidation therapy comprised three courses of anthracycline monochemotherapy (LPA96), with all-trans retinoic acid and reinforced doses of idarubicin in patients with an intermediate or high risk of relapse (LPA99). Central nervous system prophylaxis was not given. Results: Central nervous system relapse was documented in 11 patients. The 5-year cumulative incidence of central nervous system relapse was 1.7% (LPA96 3.2% and LPA99 1.2%; p=0.09). The cumulative incidence was 0%, 0.8%, and 5.5% in low-, intermediate-, and high-risk patients, respectively. Relapse risk score (p=0.0001) and the occurrence of central nervous system hemorrhage during induction (5-year cumulative incidence 18.7%, p=0.006) were independent risk factors for central nervous system relapse. Conclusions: This study shows a low incidence of central nervous system relapse in patients with acute promyelocytic leukemia following therapy with all-trans retinoic acid and anthracycline without specific central nervous system prophylaxis. Central nervous system relapse was significantly associated with high white blood cell counts and prior central nervous system hemorrhage, which emerged as independent prognostic factors.</description>
    </item> <item>
      <title>Keratinocyte growth factor improves allogeneic bone marrow engraftment through a CD4+Foxp3+ regulatory T cell-dependent mechanism (Article)</title>
      <link>http://repub.eur.nl/res/pub/25446/</link>
      <pubDate>2009-06-15T00:00:00Z</pubDate>
      <description>Keratinocyte growth factor (KGF) protects mice from acute graft-vs-host disease and graft rejection by cytoprotective and yet incompletely understood immunological mechanisms. Recently, we showed that administration of KGF induces selective peripheral expansion of CD4+Foxp3+regulatory T cells (Treg). In this study, we set out to assess whether the peripheral expansion of Treg accounts for the immunomodulatory effects of KGF after bone marrow (BM) transplantation. To exclude potentially confounding cytoprotective and thymopoietic effects of KGF, we applied KGF to congenic wild-type mice that served as T cell provider mice for T and B cell-deficient RAG-1-/-mice that were subsequently transplanted with allogeneic BM. Treatment of congenic T cell provider mice with KGF significantly improved engraftment and reduced graft rejection in BMT recipients. CD4+Foxp3+Treg remained increased for 4 wk, while expansion of congenic CD3+T cells was inhibited. To assess a causal relationship between expansion of Treg and improved BM engraftment, congenic Scurfy mice, which lack Foxp3+Treg, served as T cell provider mice and were treated with KGF. KGF-treatment of Scurfy mice did not affect engraftment nor did it inhibit the expansion of congenic T cells. These data demonstrate that administration of KGF to the T cell provider mice improves engraftment of allogeneic BM through a CD4+Foxp3+Treg-dependent mechanism. Copyright </description>
    </item> <item>
      <title>Double CEBPA mutations, but not single CEBPA mutations, define a subgroup of acute myeloid leukemia with a distinctive gene expression profile that is uniquely associated with a favorable outcome (Article)</title>
      <link>http://repub.eur.nl/res/pub/16249/</link>
      <pubDate>2009-03-26T00:00:00Z</pubDate>
      <description>Mutations in CCAAT/enhancer binding protein α (CEBPA) are seen in 5% to 14% of acute myeloid leukemia (AML) and have been associated with a favorable clinical outcome. Most AMLs with CEBPA mutations simultaneously carry 2 mutations (CEBPAdouble-mut), usually biallelic, whereas single heterozygous mutations (CEBPAsingle-mut) are less frequently seen. Using denaturing high-performance liquid chromatography and nucleotide sequencing, we identified among a cohort of 598 newly diagnosed AMLs a subset of 41 CEBPA mutant cases (28 CEBPAdouble-mut and 13 CEBPA single-mut cases) CEBPAdouble-mut associated with a unique gene expression profile as well as favorable overall and event-free survival, retained in multi-variable analysis that included cytoge-netic risk, FZT3-ITD and NPM1 mutation, white blood cell count, and age. In contrast, CEBPA single-mut AMLs did not express a discriminating signature and could not be distinguished from wild-type cases as regards clinical outcome. These results demonstrate significant underlying heterogeneity within CEBPA mutation-positive AML with prognostic relevance.</description>
    </item> <item>
      <title>Genome-wide epigenetic analysis delineates a biologically distinct immature acute leukemia with myeloid/T-lymphoid features (Article)</title>
      <link>http://repub.eur.nl/res/pub/16250/</link>
      <pubDate>2009-03-19T00:00:00Z</pubDate>
      <description>Acute myeloid leukemia is a heterogeneous disease from the molecular and biologic standpoints, and even patients with a specific gene expression profile may present clinical and molecular heterogeneity. We studied the epigenetic profiles of a cohort of patients who shared a common gene expression profile but differed in that only half of them harbored mutations of the CEBPA locus, whereas the rest presented with silencing of this gene and coexpression of certain T-cell markers. DNA methylation studies revealed that these 2 groups of patients could be readily segregated in an unsupervised fashion based on their DNA methylation profiles alone. Furthermore, CEBPA silencing was associated with the presence of an aberrant DNA hypermethylation signature, which was not present in the CEBPA mutant group. This aberrant hypermethylation occurred more frequently at sites within CpG islands. CEBPA-silenced leukemias also displayed marked hypermethylation compared with normal CD34+ hematopoietic cells, whereas CEBPA mutant cases showed only mild changes in DNA methylation compared with these normal progenitors. Biologically, CEBPA-silenced leukemias presented with a decreased response to myeloid growth factors in vitro.</description>
    </item> <item>
      <title>Management of acute promyelocytic leukemia: Recommendations from an expert panel on behalf of the European LeukemiaNet (Article)</title>
      <link>http://repub.eur.nl/res/pub/18239/</link>
      <pubDate>2009-02-26T00:00:00Z</pubDate>
      <description>The introduction of all-trans retinoic acid (ATRA) and, more recently, arsenic trioxide (ATO) into the therapy of acute promyelocytic leukemia (APL) has revolutionized the management and outcome of this disease. Several treatment strategies using these agents, usually in combination with chemotherapy, but also without or with minimal use of cytotoxic agents, have provided excellent therapeutic results. Cure of APL patients, however, is also dependent on peculiar aspects related to the management and supportive measures that are crucial to counteract life-threatening complications associated with the disease biology and molecularly targeted treatment. The European LeukemiaNet recently appointed an international panel of experts to develop evidence- and expert opinion-based guidelines on the diagnosis and management of APL. Together with providing current indications on genetic diagnosis, modern risk-adapted front-line therapy and salvage treatment, the review contains specific recommendations for the identification and management of most important complications such as the bleeding disorder, APL differentiation syndrome, QT prolongation and other ATRA-and ATO-related toxicities, as well as for molecular assessment of response to treatment. Finally, the approach to special situations is also discussed, including management of APL in children, elderly patients, and pregnant women.</description>
    </item> <item>
      <title>Myeloablative allogeneic versus autologous stem cell transplantation in adult patients with acute lymphoblastic leukemia in first remission: A prospective sibling donor versus no-donor comparison (Article)</title>
      <link>http://repub.eur.nl/res/pub/18473/</link>
      <pubDate>2009-02-05T00:00:00Z</pubDate>
      <description>While commonly accepted in poor-risk acute lymphoblastic leukemia (ALL), the role of allogeneic hematopoietic stem cell transplantation (allo-SCT) is still disputed in adult patients with standard-risk ALL. We evaluated outcome of patients with ALL in first complete remission (CR1), according to a sibling donor versus no-donor comparison. Eligible patients (433) were entered in 2 consecutive, prospective studies, of whom 288 (67%) were younger than 55 years, in CR1, and eligible to receive consolidation by either an autologous SCT or an allo-SCT. Allo-SCT was performed in 91 of 96 patients with a compatible sibling donor. Cumulative incidences of relapse at 5 years were, respectively, 24 and 55% for patients with a donor versus those without a donor (hazard ratio [HR], 0.37; 0.23-0.60; P &lt; .001). Nonrelapse mortality estimated 16% (± 4) at 5 years after allo-SCT. As a result, disease-free survival (DFS) at 5 years was significantly better in the donor group: 60 versus 42% in the no-donor group (HR: 0.60; 0.41-0.89; P= .01). After risk-group analysis, improved outcome was more pronounced in standard-risk patients with a donor, who experienced an overall survival of 69% at 5 years (P = .05). In conclusion, standard-risk ALL patients with a sibling donor may show favorable survival following SCT, due to both a strong reduction of relapse and a modest nonrelapse mortality. This trial is registered with http://www.trialregister.nl under trial ID NTR228.</description>
    </item> <item>
      <title>Differentiation syndrome in patients with acute promyelocytic leukemia treated with all- trans retinoic acid and anthracycline chemotherapy: Characteristics, outcome, and prognostic factors (Article)</title>
      <link>http://repub.eur.nl/res/pub/19339/</link>
      <pubDate>2009-01-22T00:00:00Z</pubDate>
      <description>Differentiation syndrome (DS) can be a life-threatening complication in patients with acute promyelocytic leukemia (APL) undergoing induction therapy with all- trans retinoic acid (ATRA). Detailed knowl- edge about DS has remained limited. We present an analysis of the incidence, char- acteristics, prognostic factors, and out- come of 739 APL patients treated with ATRA plus idarubicin in 2 consecutive trials (Programa Espanol de Tratamientos en Hematologíc [PETHEMA] LPA96 and LPA99). Overall, 183 patients (24.8%) ex- perienced DS, 93 with a severe form (12.6%) and 90 with a moderate form (12.2%). Severe but not moderate DS was associated with an increase in mortality. A bimodal incidence of DS was observed, with peaks occurring in the first and third weeks after the start of ATRA therapy. A multivariate analysis indicated that a WBC count greater than 5 x 109/L and an abnor- mal serum creatinine level correlated with an increased risk of developing severe DS. Patients receiving systematic pred- nisone prophylaxis (LPA99 trial) in con- trast to those receiving selective prophy- laxis with dexamethasone (LPA96 trial) had a lower incidence of severe DS. Pa- tients developing severe DS showed a reduced 7-year relapse-free survival in the LPA96 trial (60% vs 85%, P = .003), but this difference was not apparent in the LPA99 trial.</description>
    </item> <item>
      <title>A decade of genome-wide gene expression profiling in acute myeloid leukemia: Flashback and prospects (Article)</title>
      <link>http://repub.eur.nl/res/pub/27240/</link>
      <pubDate>2009-01-08T00:00:00Z</pubDate>
      <description>The past decade has shown a marked increase in the use of high-throughput assays in clinical research into human cancer, including acute myeloid leukemia (AML). In particular, genome-wide gene expression profiling (GEP) using DNA microarrays has been extensively used for improved understanding of the diagnosis, prognosis, and pathobiology of this heterogeneous disease. This review discusses the progress that has been made, places the technologic limitations in perspective, and highlights promising future avenues. </description>
    </item> <item>
      <title>Flow cytometric differential of leukocyte populations in normal bone marrow: Influence of peripheral blood contamination (Article)</title>
      <link>http://repub.eur.nl/res/pub/25008/</link>
      <pubDate>2009-01-01T00:00:00Z</pubDate>
      <description>Background: Availability of immunophenotypic reference values for the various leukocyte populations distributed in bone marrow may be helpful to recognize abnormal bone marrow development and, therefore, useful as first screening of individuals with suspected hematological malignancies or other hematopoietic disorders. Methods: A single tube four-color staining panel (CD66abce/CD14/CD45/ CD34) together with a predefined gating strategy was utilized to immunologically differentiate the distribution of the major leukocyte populations in bone marrow aspirates of healthy donors. The sample-blood erythrocyte ratio was applied to assess the amount of blood contamination of marrow and account for this in the marrow value estimates. Results: The frequency of the major leukocyte populations in bone marrow of 134 normal donors were for granulocytes: mean, 69.4%; SD, 10.3%; monocytes: mean, 4.7%; SD, 2.3%; lymphocytes: mean, 18.3%; SD, 8.7%. The frequency of the immature cell population that included precursor cells of each of the cell lineages among other cell types were mean 5.0%; SD 2.2%. The mean percentage of CD34 positive cells was 1.5%; SD 0.7%. Our results showed further that the frequency of cell populations, of which the presence is restricted to the bone marrow (e.g., CD34 + progenitor cells), is influenced by the degree of peripheral blood admixture. Between the total immature cells and purity of the bone marrow, there was a significant positive correlation demonstrated, whereas a negative correlation was found between the percentages of both lymphocytes as monocytes and the purity of the bone marrow. Conclusions: With a single tube-staining panel, we obtained reference values for flow cytometric assessment of all relevant leukocyte populations present in bone marrow that can be used as a frame of reference for better recognition of individuals with abnormal hematopoiesis. In addition, we have demonstrated the influence of the degree of peripheral blood admixture in the bone marrow aspirates on those reference values. </description>
    </item> <item>
      <title>Prediction of molecular subtypes in acute myeloid leukemia based on gene expression profiling (Article)</title>
      <link>http://repub.eur.nl/res/pub/25475/</link>
      <pubDate>2009-01-01T00:00:00Z</pubDate>
      <description>We examined the gene expression profiles of two independent cohorts of patients with acute myeloid leukemia [n=247 and n=214 (younger than or equal to 60 years)] to study the applicability of gene expression profiling as a single assay in prediction of acute myeloid leukemia-specific molecular subtypes. The favorable cytogenetic acute myeloid leukemia subtypes, i.e., acute myeloid leukemia with t(8;21), t(15;17) or inv(16), were predicted with maximum accuracy (positive and negative predictive value: 100%). Mutations in NPM1 and CEBPA were predicted less accurately (positive predictive value: 66% and 100%, and negative predictive value: 99% and 97% respectively). Various other characteristic molecular acute myeloid leukemia subtypes, i.e., mutant FLT3 and RAS, abnormalities involving 11q23, -5/5q-, -7/7q-, abnormalities involving 3q (abn3q) and t(9;22), could not be correctly predicted using gene expression profiling. In conclusion, gene expression profiling allows accurate prediction of certain acute myeloid leukemia subtypes, e.g. those characterized by expression of chimeric transcription factors. However, detection of mutations affecting signaling molecules and numerical abnormalities still requires alternative molecular methods. </description>
    </item> <item>
      <title>High INDO (indoleamine 2,3-dioxygenase) mRNA level in blasts of acute myeloid leukemic patients predicts poor clinical outcome (Article)</title>
      <link>http://repub.eur.nl/res/pub/29737/</link>
      <pubDate>2008-12-01T00:00:00Z</pubDate>
      <description>Indoleamine 2,3-dioxygenase degrades the amino acid tryptophan which is essential for T cells. Tryptophan depletion causes T-cell cycle arrest and solid tumors that express high levels of indoleamine 2,3-dioxygenase can create immune suppression. Recently, blasts of patients with acute myeloid leukemia were shown to express indoleamine 2,3-dioxygenase. We determined INDO (encoding gene for indoleamine 2,3-dioxygenase) mRNA expression in leukemic blasts of 286 patients with acute myeloid leukemia by gene-expression profiling. Results were validated by quantitative polymerase chain reaction analysis in blasts of an independent cohort of 71 patients. High INDO expression was correlated to significantly shortened overall and relapse-free survival. Correlation of INDO expression to relevant known prognostic factors and survival identified high INDO expression as a strong negative independent predicting variable for overall and relapse-free survival. Inhibition of indoleamine 2,3-dioxygenase expressed by myeloid leukemic blasts may result in breaking immune tolerance and offers new therapeutic options for patients with acute myeloid leukemia. </description>
    </item> <item>
      <title>Risk-adapted treatment of acute promyelocytic leukemia with all-trans retinoic acid and anthracycline monochemotherapy: Long-term outcome of the LPA 99 multicenter study by the PETHEMA Group (Article)</title>
      <link>http://repub.eur.nl/res/pub/28934/</link>
      <pubDate>2008-10-15T00:00:00Z</pubDate>
      <description>A previous report of the Programa de Estudio y Tratamiento de las Hemopatfas Malignas (PETHEMA) Group showed that a risk-adapted strategy combining all-trans retinoic acid (ATRA) and anthracycline monochemotherapy for induction and consolidation in newly diagnosed acute promyelocytic leukemia results in an improved outcome. Here we analyze treatment outcome of an enlarged series of patients who have been followed up for a median of 65 months. From November 1999 through July 2005 (LPA99 trial), 560 patients received induction therapy with ATRA plus idarubicin. Patients achieving complete remission received 3 courses of consolidation followed by maintenance with ATRA and low-dose chemotherapy. The 5-year cumulative incidence of relapse and disease-free survival were 11% and 84%, respectively. These results compare favorably with those obtained in the previous LPA96 study (P=.019 and P=.04, respectively). This updated analysis confirms the high antileukemic efficacy, low toxicity, and high degree of compliance of a riskadapted strategy combining ATRA and anthracycline monochemotherapy for consolidation therapy.</description>
    </item> <item>
      <title>Monosomal karyotype in acute myeloid leukemia: A better indicator of poor prognosis than a complex karyotype (Article)</title>
      <link>http://repub.eur.nl/res/pub/14492/</link>
      <pubDate>2008-10-10T00:00:00Z</pubDate>
      <description>Purpose: To investigate the prognostic value of various cytogenetic components of a complex karyotype in acute myeloid leukemia (AML). Patients and Methods: Cytogenetics and overall survival (OS) were analyzed in 1,975 AML patients age 15 to 60 years. Results: Besides AML with normal cytogenetics (CN) and core binding factor (CBF) abnormalities, we distinguished 733 patients with cytogenetic abnormalities. Among the latter subgroup, loss of a single chromosome (n = 109) conferred negative prognostic impact (4-year OS, 12%; poor outcome). Loss of chromosome 7 was most common, but outcome of AML patients with single monosomy -7 (n = 63; 4-year OS, 13%) and other single autosomal monosomies (n = 46; 4-year OS, 12%) did not differ. Structural chromosomal abnormalities influenced prognosis only in association with a single autosomal monosomy (4-year OS, 4% for very poor v 24% for poor). We derived a monosomal karyotype (MK) as a predictor for very poor prognosis of AML that refers to two or more distinct autosomal chromosome monosomies (n = 116; 4-year OS, 3%) or one single autosomal monosomy in the presence of structural abnormalities (n = 68; 4-year OS, 4%). In direct comparisons, MK provides significantly better prognostic prediction than the traditionally defined complex karyotype, which considers any three or more or five or more clonal cytogenetic abnormalities, and also than various individual specific cytogenetic abnormalities (eg, del[5q], inv[3]/t[3;3]) associated with very poor outcome. Conclusion: MK enables (in addition to CN and CBF) the prognostic classification of two new aggregates of cytogenetically abnormal AML, the unfavorable risk MK-negative category (4-year OS, 26% ± 2%) and the highly unfavorable risk MK-positive category (4-year OS, 4% ± 1%).</description>
    </item> <item>
      <title>Exon 8 splice site mutations in the gene encoding the E3-ligase CBL are associated with core binding factor acute myeloid leukemias (Article)</title>
      <link>http://repub.eur.nl/res/pub/14499/</link>
      <pubDate>2008-10-01T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>A one-mutation mathematical model can explain the age incidence of acute myeloid leukemia with mutated nucleophosmin (NPM1) (Article)</title>
      <link>http://repub.eur.nl/res/pub/26818/</link>
      <pubDate>2008-08-01T00:00:00Z</pubDate>
      <description>Acute myeloid leukemia with mutated NPM1 gene and aberrant cytoplasmic expression of nucleophosmin (NPMc+acute myeloid leukemia) shows distinctive biological and clinical features. Experimental evidence of the oncogenic potential of the nucleophosmin mutant is, however, still lacking, and it is unclear whether other genetic lesion(s), e.g. FLT3 internal tandem duplication, cooperate with NPM1 mutations in acute myeloid leukemia development. An analysis of age-specific incidence, together with mathematical modeling of acute myeloid leukemia epidemiology, can help to uncover the number of genetic events needed to cause leukemia. We collected data on age at diagnosis of acute myeloid leukemia patients from five European Centers in Germany, The Netherlands and Italy, and determined the age-specific incidence of AML with mutated NPM1 (a total of 1,444 cases) for each country. Linear regression of the curves representing age-specific rates of diagnosis per year showed similar slopes of about 4 on a double logarithmic scale. We then adapted a previously designed mathematical model of hematopoietic tumorigenesis to analyze the age incidence of acute myeloid leukemia with mutated NPM1 and found that a one-mutation model can explain the incidence curve of this leukemia entity. This model fits with the hypothesis that NPMc+acute myeloid leukemia arises from an NPM1 mutation with haploinsufficiency of the wild-type NPM1 allele. </description>
    </item> <item>
      <title>Monitoring cytomegalovirus IE-1 and PP65-specific CD4+ and CD8+ T-cell responses after allogeneic stem cell transplantation may identify patients at risk for recurrent CMV reactivations (Article)</title>
      <link>http://repub.eur.nl/res/pub/30471/</link>
      <pubDate>2008-07-01T00:00:00Z</pubDate>
      <description>We studied the recovery of CMV-specific CD4+and CD8+T-cell immunity in 52 recipients of allogeneic stem cell transplantation (SCT). The proportions of IFN-γ-producing CD4+and CD8+T cells upon in vitro activation using peptide pools representing the CMV pp65 and IE-1 proteins were assessed at multi-ple time points post SCT, and correlated with the occurrence of CMV reactivation. In a retrospective analysis, recurrent CMV reactivations occurred in 9 patients and were associated with low pp65-specific CD4+T-cell and low IE-1-specific CD8+T-cell reactivities, whereas patients without detectable CMV reactivation (n = 30) or a single reactivation (n = 13) showed a better recovery of these immune responses. CD4+T-cell responses to IE-1 were infrequent in most patients, whereas CD8+T-cell responses to pp65 occurred frequently, but did not correlate with protection against (recurrent) reactivation. Prospectively, CMV-specific T-cell responses could be studied prior to 14 reactivation episodes in 8 patients. CD4+T-cell responses to IE-1 and pp65 were positive in only 1 and 2 episodes, respectively. CD8+T-cell responses against IE-1 were positive in 4, but against pp65 in 12 episodes, again showing that CD8+T-cell reactivity against pp65 did not prevent CMV reactivation. Thus, monitoring of particular CMV-specific CD4+and CD8+T-cell responses after allogeneic SCT may identify patients at risk for recurrent CMV reactivations. </description>
    </item> <item>
      <title>MicroRNA expression profiling in relation to the genetic heterogeneity of acute myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/29105/</link>
      <pubDate>2008-05-15T00:00:00Z</pubDate>
      <description>Acute myeloid leukemia (AML) is a highly diverse disease characterized by various cytogenetic and molecular abnormalities. MicroRNAs are small noncoding RNAs that show variable expression during myeloid differentiation. MicroRNA expression in marrow blasts in 215 cases of newly diagnosed and (cyto)genetically defined AML was assessed using quantitative reverse-transcription-polymerase chain reaction (RT-PCR) for 260 human microRNAs. In the same series, mRNA gene expression profiles were established, allowing a direct comparison between microRNA and mRNA expression. We show that microRNA expression profiling following unsupervised analysis reveals distinctive microRNA signatures that correlate with cytogenetic and molecular subtypes of AML (ie, AMLs with t(8;21), t(15;17), inv(16), NPM1, and CEBPA mutations). Significantly differentially expressed microRNAs for genetic subtypes of AML were identified. Specific microRNAs with established oncogenic and tumor suppressor functions, such as mi-croRNA-155, microRNA-21, and let-7, appear to be associated with particular subtypes. Combinations of selected sets of microRNAs could predict cytogenetically normal AML with mutations in the genes of NPM1 and CEBPA and FLT3-ITD with similar accuracy as mRNA probe set combinations defined by gene expression profiling. MicroRNA expression apparently bears specific relationships to the heterogeneous pathobiology of AML. Distinctive microRNA signatures appear of potential value in the clinical diagnosis of AML. </description>
    </item> <item>
      <title>Diagnosis and prognosis in acute myeloid leukemia - The art of distinction (Article)</title>
      <link>http://repub.eur.nl/res/pub/32360/</link>
      <pubDate>2008-05-01T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>Aerosolized liposomal amphotericin B for the prevention of invasive pulmonary aspergillosis during prolonged neutropenia: A randomized, placebo-controlled trial (Article)</title>
      <link>http://repub.eur.nl/res/pub/30157/</link>
      <pubDate>2008-05-01T00:00:00Z</pubDate>
      <description>Background. Invasive pulmonary aspergillosis (IPA) is a significant problem in patients with chemotherapyinduced prolonged neutropenia. Because pulmonary deposition of conidia is the first step in developing IPA, we hypothesized that inhalation of liposomal amphotericin B would prevent IPA. Methods. We performed a randomized, placebo-controlled trial of patients with hematologic disease with expected neutropenia for ≥10 days. Patients were randomized to receive liposomal amphotericin B or placebo inhalation twice a week, using an adaptive aerosol delivery system, until neutrophil counts increased to &gt;300 cells/mm3. In subsequent neutropenic episodes, the assigned treatment was restarted. The primary end point was the occurrence of IPA according to European Organization for Research and the Treatment of Cancer-Mycoses Study Group definitions. Kaplan-Meier curves were compared with log-rank tests for intent-to-treat and on-treatment populations. Results. A total of 271 patients were studied during 407 neutropenic episodes. According to the intent-totreat analysis, 18 of 132 patients in the placebo group developed IPA versus 6 of 139 patients in the liposomal amphotericin B group (odds ratio, 0.26; 95% confidence interval, 0.09-0.72; P = .005). According to the on-treatment analysis, 13 of 97 patients receiving placebo versus 2 of 91 receiving liposomal amphotericin B developed IPA (odds ratio, 0.14; 95% confidence interval, 0.02-0.66; P = .007). Some adverse effects, but none serious, in the liposomal amphotericin B group were reported, most frequently coughing (16 patients vs. 1 patient; P = .002). Conclusion. In high-risk patients, prophylactic inhalation of liposomal amphotericin B significantly reduced the incidence of IPA. </description>
    </item> <item>
      <title>High EVI1 levels predict adverse outcome in acute myeloid leukemia: Prevalence of EVI1 overexpression and chromosome 3q26 abnormalities underestimated (Article)</title>
      <link>http://repub.eur.nl/res/pub/28804/</link>
      <pubDate>2008-04-15T00:00:00Z</pubDate>
      <description>Inappropriate expression of EVI1 (ecotropic virus integration-1), in particular splice form EVI1-1D, through chromosome 3q26 lesions or other mechanisms has been implicated in the development of high-risk acute myeloid leukemia (AML). To validate the clinical relevance of EVI1-1D, as well as of the other EVI1 splice forms and the related MDS1/EVI1 (ME) gene, real-time quantitative polymerase chain reaction was performed in 534 untreated adults with de novo AML. EVI1-1D was highly expressed in 6% of cases (n = 32), whereas 7.8% were EVI1+(n = 41) when all splice variants were taken into account. High EVI1 predicted a distinctly worse event-free survival (HR = 1.9; P = .002) and disease-free survival (HR = 2.1, P = .006) following multivariate analysis. Importantly, we distinguished a subset of EVI1+cases that lacked expression of ME (EVI1+ME-; n = 17) from cases that were ME+(EVI1+ME+; n = 24). The atypical EVI1+ME-expression pattern exhibited cytogenetically detectable chromosomal 3q26 breakpoints in 8 cases. Fluorescence in situ hybridization revealed 7 more EVI1+ME-cases that carried cryptic 3q26 breakpoints, which were not found in the EVI1+ME+group. EVI1+ME-expression predicts an extremely poor prognosis distinguishable from the general EVI1+AML patients (overall survival [OS]: P &lt; .001 and event-free survival [EFS]: P = .002). We argue that EVI1/ME quantitative expression analysis should be implemented in the molecular diagnostic procedures of AML. </description>
    </item> <item>
      <title>Causes and prognostic factors of remission induction failure in patients with acute promyelocytic leukemia treated with all-trans retinoic acid and idarubicin (Article)</title>
      <link>http://repub.eur.nl/res/pub/28818/</link>
      <pubDate>2008-04-01T00:00:00Z</pubDate>
      <description>An understanding of the prognostic factors associated with the various forms of induction mortality in patients with acute promyelocytic leukemia (APL) has remained remarkably limited. This study reports the incidence, time of occurrence, and prognostic factors of the major categories of induction failure in a series of 732 patients of all ages (range, 2-83 years) with newly diagnosed APL who received all-trans retinoic acid (ATRA) plus idarubicin as induction therapy in 2 consecutive studies of the Programa de Estudio y Tratamiento de las Hemopatias Malignas (PETHEMA) Group. Complete remission was attained in 666 patients (91%). All the 66 induction failures were due to induction death. Hemorrhage was the most common cause of induction death (5%), followed by infection (2.3%) and differentiation syndrome (1.4%). Multivariate analysis identified specific and distinct pretreatment characteristics to correlate with an increased risk of death caused by hemorrhage (abnormal creatinine level, increased peripheral blast counts, and presence of coagulopathy), infection (age &gt;60 years, male sex, and fever at presentation), and differentiation syndrome (Eastern Cooperative Oncology Group [ECOG] score &gt;1 and low albumin levels), respectively. These data furnish clinically relevant information that might be useful for designing more appropriately risk-adapted treatment protocols aimed at reducing the considerable problem of induction mortality in APL. </description>
    </item> <item>
      <title>A 2-gene classifier for predicting response to the farnesyltransferase inhibitor tipifarnib in acute myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/28742/</link>
      <pubDate>2008-03-01T00:00:00Z</pubDate>
      <description>At present, there is no method available to predict response to farnesyltrans- ferase inhibitors (FTIs). We analyzed gene expression profiles from the bone marrow of patients from a phase 2 study of the FTI tipifarnib in older adults with previously untreated acute myeloid leukemia (AML). The RASGRP1/APTX gene expression ratio was found to predict response to tipifarnib with the greatest accuracy using a "leave one out" cross validation (LOOCV; 96%). RASGRP1 is a guanine nucleotide exchange factor that activates RAS, while APTX (aprataxin) is involved in DNA excision repair. The utility of this classifier for predicting response to tipifarnib was validated in an independent set of 58 samples from relapsed or refractory AML, with a negative predictive value (NPV) and positive predictive value (PPV) of 92% and 28%, respectively (odds ratio of 4.4). The classifier also predicted for improved overall survival (154 vs 56 days; P &lt; .001), which was independent of other covariates, including a previously described prognostic gene expression classifier. Therefore, these data indicate that a 2-gene expression assay may have utility in categorizing a population of patients with AML who are more likely to respond to tipifarnib. </description>
    </item> <item>
      <title>Dose-finding study of imatinib in combination with intravenous cytarabine: Feasibility in newly diagnosed patients with chronic myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/28746/</link>
      <pubDate>2008-03-01T00:00:00Z</pubDate>
      <description>The HOVON cooperative study group performed a feasibility study of escalated imatinib and intravenous cytarabine in 165 patients with early chronic-phase chronic myeloid leukemia (CML). Patients received 2 cycles of intravenous cytara- bine (200 mg/m2or 1000 mg/m2days 1-7) in conjunction with imatinib (200 mg, 400 mg, 600 mg, or 800 mg), according to predefined, successive dose levels. All dose levels proved feasible. Seven dose- limiting toxicities (DLTs) were observed in 302 cycles of chemotherapy, which werecaused bystreptococcal bacteremia in 5 cases. Intermediate-dose cytarabine (1000 mg/m2) prolonged time to neutro- phil recovery and platelet recovery compared with a standard dose (200 mg/m2). High-dose imatinib (600 mg or 800 mg) extended the time to platelet recovery compared with a standard dose (400 mg). More infectious complications common toxicity criteria (CTC) grade 3 or 4 were observed after intermediate-dose cytara- bine compared with a standard-dose of cytarabine. Early response data after combination therapy included a complete cy-togenetic response in 48% and a major molecular response in 30% of patients, which increased to 46% major molecular responses at 1 year, including 13% complete molecular responses. We conclude that combination therapy of escalating dosages of imatinib and cytarabine is feasible. This study was registered at www.kankerbestrijding.nl as no. CKTO- 2001-03. </description>
    </item> <item>
      <title>Gene transactivation without direct DNAbinding defines a novel gain-of-function for PML-RARα (Article)</title>
      <link>http://repub.eur.nl/res/pub/28843/</link>
      <pubDate>2008-02-12T00:00:00Z</pubDate>
      <description>PML-RARα is the causative oncogene in 5% to 10% of the cases of acute myeloid leukemia. At physiological concentrations of retinoic acid, PML-RARα silences RARα target genes, blocking differentiation of the cells. At high concentrations of ligand, it (re)activates the transcription of target genes, forcing terminal differentiation. The study of RARα target genes that mediate this differentiation has identified several genes that are important for proliferation and differentiation control in normal and malignant hematopoietic cells. In this paper, we show that the PML-RARα fusion protein not only interferes with the transcription of regular RARα target genes. We show that the ID1 and ID2 promoters are activated by PML-RARα but, unexpectedly, not by wildtype RARα/RXR. Our data support a model in which the PML-RARα fusion protein regulates a novel class of target genes by interaction with the Sp1 and NF-Y transcription factors, without directly binding to the DNA, defining a gain-of-function for the oncoprotein. </description>
    </item> <item>
      <title>SNPExpress: Integrated visualization of genome-wide genotypes, copy numbers and gene expression levels (Article)</title>
      <link>http://repub.eur.nl/res/pub/30367/</link>
      <pubDate>2008-01-25T00:00:00Z</pubDate>
      <description>Background: Accurate analyses of comprehensive genome-wide SNP genotyping and gene expression data sets is challenging for many researchers. In fact, obtaining an integrated view of both large scale SNP genotyping and gene expression is currently complicated since only a limited number of appropriate software tools are available. Results: We present SNPExpress, a software tool to accurately analyze Affymetrix and Illumina SNP genotype calls, copy numbers, polymorphic copy number variations (CNVs) and Affymetrix gene expression in a combinatorial and efficient way. In addition, SNPExpress allows concurrent interpretation of these items with Hidden-Markov Model (HMM) inferred Loss-of-Heterozygosity (LOH)- and copy number regions. Conclusion: The combined analyses with the easily accessible software tool SNPExpress will not only facilitate the recognition of recurrent genetic lesions, but also the identification of critical pathogenic genes. </description>
    </item> <item>
      <title>Response: Allogeneic hematopoetic stem-cell transplantation in acute myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/35050/</link>
      <pubDate>2007-12-15T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>Distinct gene expression profiles of acute myeloid/T-lymphoid leukemia with silenced CEBPA and mutations in NOTCH1 (Article)</title>
      <link>http://repub.eur.nl/res/pub/35102/</link>
      <pubDate>2007-11-15T00:00:00Z</pubDate>
      <description>Gene expression profiling of acute myeloid leukemia (AML) allows the discovery of previously unrecognized molecular entities. Here, we identified a specific subgroup of AML, defined by an expression profile resembling that of AMLs with mutations in the myeloid transcription factor CCAAT/enhancer-binding protein alpha (C/EBPα), while lacking such mutations. We found that in these leukemias, the CEBPA gene was silenced, which was associated with frequent promoter hypermethylation. The leukemias phenotypically showed aberrant expression of T-cell genes, of which CD7 was most consistent. We identified 2 mechanisms that may contribute to this phenotype. First, absence of Cebpa led to up-regulation of specific T-cell transcripts (ie, Cd7 and Lck) in hematopoietic stem cells isolated from conditional Cebpa knockout mice. Second, the enhanced expression of TRIB2, which we identify here as a direct target of the T-cell commitment factor NOTCH1, suggested aberrantly activated Notch signaling. Putatively activating NOTCH1 mutations were found in several specimens of the newly identified subgroup, while a large set of control AMLs was mutation negative. A gene expression prediction signature allowed the detection of similar cases of leukemia in independent series of AML. </description>
    </item> <item>
      <title>Segmental uniparental disomy as a recurrent mechanism for homozygous CEBPA mutations in acute myeloid leukemia [13] (Article)</title>
      <link>http://repub.eur.nl/res/pub/36242/</link>
      <pubDate>2007-11-01T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>Acute Myeloid Leukemia and the Position of Autologous Stem Cell Transplantation (Article)</title>
      <link>http://repub.eur.nl/res/pub/35151/</link>
      <pubDate>2007-10-01T00:00:00Z</pubDate>
      <description>Most adult patients with acute myeloid leukemia (AML) who reach a complete remission (CR) after induction chemotherapy will relapse if they do not receive further therapy. Autologous stem cell transplantation (SCT) represents one of the options of postremission therapy in AML. Here we discuss the therapeutic impact of consolidation treatment with autologous SCT that has been studied extensively. Meta-analyses of published randomized trials using bone marrow as the source of stem cells show a modest improvement of disease-free survival as compared to nonmyeloablative chemotherapy. However, there is no apparent improvement of overall survival, probably due to the slightly increased mortality associated with autologous bone marrow transplantation (BMT). Subsequently, the value of autologous SCT in different prognostic subsets of AML is discussed. Autologous mobilized peripheral blood stem cell (PBSC) transplantation offers a much faster hematopoietic recovery and is associated with reduced morbidity and treatment-related mortality. To fully appreciate the role of autologous PBSC transplantation, the results of a recently closed randomized trial must be awaited. </description>
    </item> <item>
      <title>IL-7 mediated protection against minor antigen-mismatched allograft rejection is associated with enhanced recovery of regulatory T cells (Article)</title>
      <link>http://repub.eur.nl/res/pub/36058/</link>
      <pubDate>2007-08-01T00:00:00Z</pubDate>
      <description>Background and Objectives: Interleukin-7 (IL-7) has been studied for its possible immunorestorative capacities following stem cell transplantation and has been shown to enhance post-transplant immune recovery predominantly by peripheral T-cell expansion. A major concern of IL-7 is its possible aggravating effect on graft-versus-host and host-versus-graft reactivity. Design and Methods: To study the effect of IL-7 on host-versus-graft reactivity, we applied IL-7 in an experimental transplantation model using RAG-1-/-mice supplied with B6 CD45.1 congenic T cells as recipients of T-cell depleted allogeneic bone marrow grafts. Results: Rejection of minor antigen-mismatched bone marrow was significantly reduced in IL-7 treated recipients compared with PBS treated control mice. Rejection was observed in 2 out of 18 IL-7 treated mice compared with 9 out of 17 PBS treated mice (11% vs. 53%; p=0.012). IL-7 administration resulted in enhanced recovery of peripheral blood CD4+CD25+regulatory T cells (Treg) with a concomitant increase in peripheral blood Foxp3 mRNA expression. IL-7Rα (CD127) was expressed by the vast majority of CD4+Foxp3+T cells. The incidence of graft rejection following fully MHC mismatched bone marrow transplantation was not reduced nor enhanced by IL-7 administration. Interpretation and Conclusions: Post-transplant IL-7 administration protects against minor antigen-mismatched bone marrow rejection, which may be due to enhanced Treg recovery. </description>
    </item> <item>
      <title>The expression of the Peripheral Cannabinoid receptor on cells of the immune system and Non-Hodgkin's lymphomas (Article)</title>
      <link>http://repub.eur.nl/res/pub/36621/</link>
      <pubDate>2007-07-01T00:00:00Z</pubDate>
      <description>The peripheral cannabinoid receptor CB2 is expressed highly on normal human B-lymphocytes. C-terminal specific anti-CB2 antibody recognises a non-phosphorylated inactive receptor on naïve and resting B-lymphocytes. Another, N-terminal specific CB2 antibody, primarily recognises B-cells present in the germinal centres of secondary follicles in lymph nodes. We hypothesise that N-terminal specific CB2 antibody recognises activated CB2 receptors. In this study, we showed using these antibodies, that expression of CB2 is generally absent on T-lymphocytes in reactive, non-malignant human lymphoid tissues. Applying single and dual immunohistochemistry, CD23+follicular dendritic cells and a small but significant subpopulation of CD68+macrophages showed positive staining with the N-terminal specific CB2 antibody but not with the C-terminal specific CB2 antibody. This may indicate the presence of an active CB2 receptor on these cells with possible involvement in immunomodulation. In contrast to the low expression on normal T-cells, abundant levels of CB2 protein were present on T-non-Hodgkin's lymphomas (NHL). Moreover, in many B-NHL, high CB2 protein expression was found as well. In contrast to the distinct expression patterns in normal immune tissues using the two different CB2 antibodies, NHL specimens in general stained positively with both. We conclude that CB2 receptor expression pattern may be abnormal in NHL.</description>
    </item> <item>
      <title>Aphase 2 study of the oral farnesyltransferase inhibitor tipifarnib in patients with refractory or relapsed acute myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/35368/</link>
      <pubDate>2007-06-15T00:00:00Z</pubDate>
      <description>This phase 2 study evaluated the efficacy and safety of the oral farnesyltransferase inhibitor tipifarnib in adults with refractory or relapsed acute myeloid leukemia (AML). Patients (n = 252) received tipifarnib 600 mg twice a day for 21 days in 28-day cycles. Median age was 62 years; 99 (39%) patients were 65 years or older. Eleven (4%) of 252 patients achieved complete remission (CR) or complete remission with incomplete platelet recovery (CRp; 9 CR and 2 CRp). Nineteen patients (8%), including those who achieved CR/CRp, achieved a reduction in bone marrow blasts to less than 5% blasts. Bone marrow blasts were reduced more than 50% in an additional 8 patients (total = 27; 11%). Median survival was 369 days for patients who achieved CR/CRp. Myelo-suppression was the most common adverse event. The most common nonhematologic toxicities were fever, nausea, and hypokalemia. Single-agent treatment with tipifarnib induced durable CR/CRp, which was associated with prolonged survival, in some patients with refractory or relapsed AML. The response rate observed in this heavily pretreated group of patients suggests the requirement to enhance the response rate either by combining tipifarnib with other active agents or determining factors that are predictive of response. </description>
    </item> <item>
      <title>Pharmacokinetics of mycophenolate mofetil in hematopoietic stem cell transplant recipients (Article)</title>
      <link>http://repub.eur.nl/res/pub/35791/</link>
      <pubDate>2007-06-01T00:00:00Z</pubDate>
      <description>Mycophenolate mofetil (MMF), a prodrug of mycophenolic acid (MPA), is increasingly used in the prophylaxis of graft-versus-host disease (GVHD) after hematopoietic stem cell transplantation (HCT). Few pharmacokinetic data are available about the use of MMF for this indication. This case series aimed at analyzing the pharmacokinetics of MMF in a population of HCT recipients representative for everyday practice. From 15 HCT recipients, serial plasma samples were taken after twice-daily oral intake of MMF. Plasma concentrations of total MPA and its glucuronide metabolites, as well as free MPA, were quantified. Median apparent oral MPA clearance (CL/F), apparent half-life, and total MPA area under the curve for hours 0 to 12 (AUC0-12, normalized to 1000 mg MMF) were, respectively, 56 L/h (range: 29-98 L/h), 2.3 hours (range: 0.8-5.7 hours), and 18.0 mg*h/L (range: 10-35 mg*h/L). Total MPA concentrations were below 2 mg/L 8 hours after MMF administration, indicating reduced enterohepatic recirculation. Median free MPA AUC0-12 (normalized to 1000 mg MMF) was 224 μg*h/L (range: 56-411 μg*h/L). Because of high CL/F, total MPA exposure in HCT recipients is low and apparent half-life is short in comparison with reference values from renal transplantation. Exposure may be improved in HCT recipients by higher or more frequent MMF dosing. </description>
    </item> <item>
      <title>Results of a HOVON/SAKK donor versus no-donor analysis of myeloablative HLA-identical sibling stem cell transplantation in first remission acute myeloid leukemia in young and middle-aged adults: Benefits for whom? (Article)</title>
      <link>http://repub.eur.nl/res/pub/35454/</link>
      <pubDate>2007-05-01T00:00:00Z</pubDate>
      <description>The Dutch-Belgian Hemato-Oncology Cooperative Group and the Swiss Group for Clinical Cancer Research (HOVON-SAKK) collaborative study group evaluated out-come of patients (pts) with acute myeloid leukemia (AML) in first remission (CR1) entered in 3 consecutive studies according to a donor versus no-donor comparison. Between 1987 and 2004, 2287 pts were entered in these studies of whom 1032 pts (45%) without FAB M3 or t(15;17) were in CR1 after 2 cycles of chemotherapy, received consolidation treatment, and were younger than 55 years of age and therefore eligible for allogeneic hematopoietic stem cell transplantation (allo-SCT). An HLA-identical sibling donor was available for 326 pts (32%), whereas 599 pts (58%) lacked such a donor, and information was not available in 107 pts. Compliance with allo-SCT was 82% (268 of 326). Cumulative incidences of relapse were, respectively, 32% versus 59% for pts with versus those without a donor (P &lt; .001). Despite more treatmentrelated mortality (TRM) in the donor group (21% versus 4%, P &lt; .001), disease-free survival (DFS) appeared significantly better in the donor group (48% ± 3% versus 37% ± 2% in the no-donor group, P &lt; .001). Following risk-group analysis, DFS was significantly better for pts with a donor and an intermediate- (P = .01) or poor-risk profile (P = .003) and also better in pts younger than 40 years of age (P &lt; .001). We evaluated our results and those of the previous MRC, BGMT, and EORTC studies in a meta-analysis, which revealed a significant benefit of 12% in overall survival (OS) by donor availability for all patients with AML in CR1 without a favorable cytogenetic profile. </description>
    </item> <item>
      <title>Differential regulation of Foxo3a target genes in erythropoiesis (Article)</title>
      <link>http://repub.eur.nl/res/pub/35952/</link>
      <pubDate>2007-05-01T00:00:00Z</pubDate>
      <description>The cooperation of stem cell factor (SCF) and erythropoietin (Epo) is required to induce renewal divisions in erythroid progenitors, whereas differentiation to mature erythrocytes requires the presence of Epo only. Epo and SCF activate common signaling pathways such as the activation of protein kinase B (PKB) and the subsequent phosphorylation and inactivation of Foxo3a. In contrast, only Epo activates Stat5. Both Foxo3a and Stat5 promote erythroid differentiation. To understand the interplay of SCF and Epo in maintaining the balance between renewal and differentiation during erythroid development, we investigated differential Foxo3a target regulation by Epo and SCF. Expression profiling revealed that a subset of Foxo3a targets was not inhibited but was activated by Epo. One of these genes was Cited2. Transcriptional control of Epo/Foxo3a-induced Cited2 was studied and compared with that of the Epo-repressed Foxo3a target Btg1. We show that in response to Epo, the allegedly growth-inhibitory factor Foxo3a associates with the allegedly growth-stimulatory factor Stat5 in the nucleus, which is required for Epo-induced Cited2 expression. In contrast, Btg1 expression is controlled by the cooperation of Foxo3a with cyclic AMP- and Jun kinase-dependent Creb family members. Thus, Foxo3a not only is an effector of PKB but also integrates distinct signals to regulate gene expression in erythropoiesis. Copyright </description>
    </item> <item>
      <title>CD34-related coexpression of MDR1 and BCRP indicates a clinically resistant phenotype in patients with acute myeloid leukemia (AML) of older age (Article)</title>
      <link>http://repub.eur.nl/res/pub/36469/</link>
      <pubDate>2007-05-01T00:00:00Z</pubDate>
      <description>Clinical resistance to chemotherapy in acute myeloid leukemia (AML) is associated with the expression of the multidrug resistance (MDR) proteins P-glycoprotein, encoded by the MDR1/ABCB1 gene, multidrug resistant-related protein (MRP/ABCC1), the lung resistance-related protein (LRP), or major vault protein (MVP), and the breast cancer resistance protein (BCRP/ABCG2). The clinical value of MDR1, MRP1, LRP/ MVP, and BCRP messenger RNA (mRNA) expression was prospectively studied in 154 newly diagnosed AML patients ≤60 years who were treated in a multicenter, randomized phase 3 trial. Expression of MDR1 and BCRP showed a negative whereas MRP1 and LRP showed a positive correlation with high white blood cell count (respectively, p&lt;0.05, p&lt;0.001,p&lt;0.001 and p&lt;0.001). Higher BCRP mRNA was associated with secondary AML (p&lt;0.05). MDR1 and BCRP mRNA were highly significantly associated (p&lt;0.001), as were MRP1 and LRP mRNA (p&lt;0.001) expression. Univariate regression analyses revealed that CD34 expression, increasing MDR1 mRNA as well as MDR1/BCRP coexpression, were associated with a lower complete response (CR) rate and with worse event-free survival and overall survival. When adjusted for other prognostic actors, only CD34-related MDR1/BCRP coexpression remained significantly associated with a lower CR rate (p=0.03), thereby identifying a clinically resistant subgroup of elderly AML patients. </description>
    </item> <item>
      <title>The emerging role of targeted therapy for hematologic malignancies: Update on bortezomib and tipifarnib (Article)</title>
      <link>http://repub.eur.nl/res/pub/36666/</link>
      <pubDate>2007-04-16T00:00:00Z</pubDate>
      <description>As therapy for hematologic malignancy evolves, new regimens and novel agents that target specific cellular processes allow a more optimistic prognosis for many patients. Bortezomib and tipifarnib are two new, targeted treatments for hematologic malignancies. Bortezomib, a proteasome inhibitor, has shown impressive efficacy in patients with relapsed multiple myeloma and as initial treatment, including before autologous stem cell transplantation. It has been studied as monotherapy and in combination with standard treatments such as dexamethasone, and with newer agents such as the immunomodulators thalidomide and lenalidomide; response is encouraging, even in patients who have relapsed after previously receiving components of a regimen as single agents. Bortezomib is generally well tolerated, including in combination with novel and conventional agents. Tipifarnib is a specific inhibitor of farnesyltransferase. Clinical trials in patients with high-risk acute leukemias and myelodysplastic syndromes have demonstrated good efficacy with tipifarnib. Continued investigation with these new, targeted treatments will further define their use as treatment options in patients with hematologic cancer. </description>
    </item> <item>
      <title>Identification of molecular predictors of response in a study of tipifarnib treatment in relapsed and refractory acute myelogenous leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/36684/</link>
      <pubDate>2007-04-01T00:00:00Z</pubDate>
      <description>Purpose: Microarray technology was used to identify gene expression markers that predict response to the orally available farnesyltransferase inhibitor tipifarnib (Zarnestra, R115777) in acute myelogenous leukemia (AML). Experimental Design: Gene expression profiles from 58 bone marrow samples from a cohort of relapsed and refractory AML patients were analyzed on the Affymetrix U133A gene chip that contains ∼22,000 genes. Results: Supervised statistical analysis identified eight gene expression markers that could predict patient response to tipifarnib. The most robust gene was the lymphoid blast crisis oncogene (AKAP13), which predicted response with an overall accuracy of 63%. This gene provided a negative predictive value of 93% and a positive predictive value of 31% (increased from 18%). AKAP13 was overexpressed in patients who were resistant to tipifarnib. When overexpressed in the HL60 and THP1 cell lines, AKAP13 increased the resistance to tipifarnib by approximately 5- to 7-fold. Conclusion: Diagnostic gene expression signatures may be used to select a group of AML patients that might respond to tipifarnib. </description>
    </item> <item>
      <title>High-vs low-dose cytarabine combined with interferon alfa in patients with first chronic phase chronic myeloid leukemia. A prospective randomized phase III study (Article)</title>
      <link>http://repub.eur.nl/res/pub/36524/</link>
      <pubDate>2007-02-01T00:00:00Z</pubDate>
      <description>A prospective randomized phase III study was performed to evaluate whether intensified cytarabine would induce a higher response rate and longer event-free interval as compared to low-dose cytarabine in chronic myeloid leukemia (CML). One hundred and eighteen patients with CML in early chronic phase entered the study. Twenty-eight out of 32 patients assigned to group A received two cycles of a combination of intensified cytarabine and idarubicin followed by interferon alfa (IFN-α) maintenance, 28 patients in group B received standard treatment by a combination of low-dose cytarabine and IFN-α. Forty-nine patients with a human leukocyte antigen-identical sibling donor proceeded to allogeneic stem cell transplantation (allo-SCT) and nine patients were excluded from the analysis. Hematological response was observed in 97% of the patients in group A vs 86% of the patients in group B during the first year of treatment. In group A, 16 patients (50%) achieved a major cytogenetic response, which compared to seven patients (25%) with a major cytogenetic response in group B. With a median follow-up of 58 months (range 34-76), event-free survival was not significantly different between arms A and B. The estimated 5-year survival rate was 56% in the intensified arm and 77% in the low-dose arm (P=0.05). Recipients of allo-SCT showed a 5-year estimated survival rate of 55%. Although intensified cytarabine induced a higher initial percentage of major and complete cytogenetic responses, responses were not sustained by IFN-α maintenance therapy. </description>
    </item> <item>
      <title>A recurrent in-frame insertion in a CEBPA transactivation domain is a polymorphism rather than a mutation that does not affect gene expression profiling-based clustering of AML [5] (Article)</title>
      <link>http://repub.eur.nl/res/pub/35657/</link>
      <pubDate>2007-01-01T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>Various distinctive cytogenetic abnormalities in patients with acute myeloid leukaemia aged 60 years and older express adverse prognostic value: Results from a prospective clinical trial (Article)</title>
      <link>http://repub.eur.nl/res/pub/35677/</link>
      <pubDate>2007-01-01T00:00:00Z</pubDate>
      <description>Diagnostic cytogenetic abnormalities are considered important prognostic factors in patients with acute myeloid leukaemia (AML). However, the prognostic assessments have mainly been derived from patients with AML aged &lt;60 years. Two recent studies of AML patients of 60 years and older proposed prognostic classifications with distinct discrepancies. To further study the prognostic value of cytogenetic abnormalities in this patient population, we have evaluated cytogenetic abnormalities in a series of 293 untreated patients with AML aged 60 years and older, included in a randomised phase 3 trial, also in relation to patient characteristics and clinical outcome. The most frequently observed cytogenetic abnormality was trisomy 8 (+8), in 31 (11%) patients. Abnormalities, such as -5, 5q-, abn(17p) and abn(17q), were almost exclusively present in complex karyotypes. A relatively favourable outcome was only observed in five patients with core-binding factor abnormalities t(8;21) and inv(16)/del(16)/ t(16;16). However, most of the other evaluated cytogenetic abnormalities, such as 5q-, -7, +8, abn(17p), abn(17q), and complex aberrations expressed a more adverse prognosis when compared with patients with AML aged 60 years and older with a normal karyotype. Large studies to confirm the prognosis of individual cytogenetic aberrations are warranted. </description>
    </item> <item>
      <title>On the road to new drugs in acute myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/36228/</link>
      <pubDate>2007-01-01T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>HeatMapper: powerful combined visualization of gene expression profile correlations, genotypes, phenotypes and sample characteristics. (Article)</title>
      <link>http://repub.eur.nl/res/pub/14018/</link>
      <pubDate>2006-07-12T00:00:00Z</pubDate>
      <description>BACKGROUND: Accurate interpretation of data obtained by unsupervised analysis of large scale expression profiling studies is currently frequently performed by visually combining sample-gene heatmaps and sample characteristics. This method is not optimal for comparing individual samples or groups of samples. Here, we describe an approach to visually integrate the results of unsupervised and supervised cluster analysis using a correlation plot and additional sample metadata. RESULTS: We have developed a tool called the HeatMapper that provides such visualizations in a dynamic and flexible manner and is available from http://www.erasmusmc.nl/hematologie/heatmapper/. CONCLUSION: The HeatMapper allows an accessible and comprehensive visualization of the results of gene expression profiling and cluster analysis.</description>
    </item> <item>
      <title>T-lymphocyte reconstitution following rigorously T-cell-depleted versus unmodified autologous stem cell transplants (Article)</title>
      <link>http://repub.eur.nl/res/pub/21823/</link>
      <pubDate>2006-04-01T00:00:00Z</pubDate>
      <description>Abstract

We compared the kinetics of T-cell recovery after extensive ex vivo and in vivo T-cell depleted autologous stem cell transplantation (SCT) for multiple sclerosis (MS; n=8) with unmodified SCT for hematological malignancies (HM; n=39). Both patient group showed a very protracted recovery of 'naive' CD4(+), 45R0(-) ( approximately CD45RA(+)) T-cells. Within the 'primed' CD4(+), 45R0(+) T-cells, the 'central memory' cells expressing the CD62L and CD27 markers were the slowest to recover. The repopulating T-cells were highly activated, as shown by increased expression of HLA-DR and the apoptosis marker CD95. The capability of CD4(+) and CD8(+) T-cells to produce IFN-gamma, IL-2 and TNF-alpha had reached normal ranges from 2 months post SCT onwards. Unexpectedly, the kinetics of T-cell recovery between 3 and 12 months post transplant was similar in T-depleted and unmodified SCT. Before SCT, the HM patients showed lymphopenia of all T-cell subsets, upregulated HLA-DR and CD95 expression and increased cytokine responses. We suggest that the similar kinetics of T-cell recovery in the two patient groups may be explained by the susceptibility to apoptosis of the activated CD4(+) T-cells in the autografts of the HM patients. This susceptibility to apoptosis would interfere with a swift and sustained CD4(+) T-cell regeneration post SCT.</description>
    </item> <item>
      <title>The effect of oligonucleotide microarray data pre-processing on the analysis of patient-cohort studies. (Article)</title>
      <link>http://repub.eur.nl/res/pub/13984/</link>
      <pubDate>2006-03-02T00:00:00Z</pubDate>
      <description>BACKGROUND: Intensity values measured by Affymetrix microarrays have to be both normalized, to be able to compare different microarrays by removing non-biological variation, and summarized, generating the final probe set expression values. Various pre-processing techniques, such as dChip, GCRMA, RMA and MAS have been developed for this purpose. This study assesses the effect of applying different pre-processing methods on the results of analyses of large Affymetrix datasets. By focusing on practical applications of microarray-based research, this study provides insight into the relevance of pre-processing procedures to biology-oriented researchers. RESULTS: Using two publicly available datasets, i.e., gene-expression data of 285 patients with Acute Myeloid Leukemia (AML, Affymetrix HG-U133A GeneChip) and 42 samples of tumor tissue of the embryonal central nervous system (CNS, Affymetrix HuGeneFL GeneChip), we tested the effect of the four pre-processing strategies mentioned above, on (1) expression level measurements, (2) detection of differential expression, (3) cluster analysis and (4) classification of samples. In most cases, the effect of pre-processing is relatively small compared to other choices made in an analysis for the AML dataset, but has a more profound effect on the outcome of the CNS dataset. Analyses on individual probe sets, such as testing for differential expression, are affected most; supervised, multivariate analyses such as classification are far less sensitive to pre-processing. CONCLUSION: Using two experimental datasets, we show that the choice of pre-processing method is of relatively minor influence on the final analysis outcome of large microarray studies whereas it can have important effects on the results of a smaller study. The data source (platform, tissue homogeneity, RNA quality) is potentially of bigger importance than the choice of pre-processing method.</description>
    </item> <item>
      <title>Candida krusei transmission among hematology patients resolved by adapted antifungal prophylaxis and infection control measures. (Article)</title>
      <link>http://repub.eur.nl/res/pub/13985/</link>
      <pubDate>2006-03-01T00:00:00Z</pubDate>
      <description>A sudden increase in neutropenic hematology patients with Candida krusei colonization and bacteremia prompted a longitudinal epidemiological investigation. We identified 39 patients; 13 developed candidemia, and three died; 25 patients carried the same genotype. We intervened by changing antifungal prophylaxis and implementing strict infection control measures. The incidence dropped immediately.</description>
    </item> <item>
      <title>The common viral insertion site Evi12 is located in the 5'-noncoding region of Gnn, a novel gene with enhanced expression in two subclasses of human acute myeloid leukemia. (Article)</title>
      <link>http://repub.eur.nl/res/pub/13774/</link>
      <pubDate>2005-05-01T00:00:00Z</pubDate>
      <description>The leukemia and lymphoma disease locus Evi12 was mapped to the noncoding region of a novel gene, Gnn (named for Grp94 neighboring nucleotidase), that is located immediately upstream of the Grp94/Tra1 gene on mouse chromosome 10. The Gnn gene is conserved in mice and humans. Expression of fusion constructs between GFP and Gnn cDNA isoforms in HEK-293 cells showed that Gnn proteins are located mainly in the cytoplasm. Immunoblotting experiments demonstrated the presence of multiple Gnn protein isoforms in most organs, with the lowest levels of expression of the protein detected in bone marrow and spleen. The Evi12-containing leukemia cell line NFS107 showed high levels of expression of a approximately 150-kDa Gnn isoform (Gnn107) that was not observed in control cell lines. Overexpression may be due to the viral insertion in Evi12. The Gnn107 protein is probably encoded by a Gnn cDNA isoform that is expressed exclusively in NFS107 cells and that includes sequences of TU12B1-TY, a putative protein with homology to 5'-nucleotidase enzymes. Interestingly, using Affymetrix gene expression data of a cohort of 285 patients with acute myeloid leukemia (AML), we found that GNN/TU12B1-TY expression was specifically increased in two AML clusters. One cluster consisted of all AML patients with a t(8;21) translocation, and the second cluster consisted of AML patients with a normal karyotype carrying a FLT3 internal tandem duplication. These findings suggest that we identified a novel proto-oncogene that may be causally linked to certain types of human leukemia.</description>
    </item> <item>
      <title>The value of the MDR1 reversal agent PSC-833 in addition to daunorubicin and cytarabine in the treatment of elderly patients with previously untreated acute myeloid leukemia (AML), in relation to MDR1 status at diagnosis (Article)</title>
      <link>http://repub.eur.nl/res/pub/8251/</link>
      <pubDate>2005-01-01T00:00:00Z</pubDate>
      <description>To determine whether MDR1 reversal by the addition of the P-glycoprotein
      (P-gp) inhibitor PSC-833 to standard induction chemotherapy would improve
      event-free survival (EFS), 419 untreated patients with acute myeloid
      leukemia (AML) aged 60 years and older were randomized to receive 2
      induction cycles of daunorubicin and cytarabine with or without PSC-833.
      Patients in complete remission were then given 1 consolidation cycle
      without PSC-833. Neither complete response (CR) rate (54% versus 48%; P =
          .22), 5-year EFS (7% versus 8%; P = .53), disease-free survival (DFS; 13%
      versus 17%; P = .06) nor overall survival (OS; 10% in both arms; P = .52)
      were significantly improved in the PSC-833 arm. An integrated P-gp score
      (IPS) was determined based on P-gp function and P-gp expression in AML
      cells obtained prior to treatment. A higher IPS was associated with a
      significantly lower CR rate and worse EFS and OS. There was no significant
      interaction between IPS and treatment arm with respect to CR rate and
      survival, indicating also a lack of benefit of PSC-833 in P-gp-positive
      patients. The role of strategies aimed at inhibitory P-gp and other
      drug-resistance mechanisms continues to be defined in the treatment of
      patients with AML.</description>
    </item> <item>
      <title>Translational control of putative protooncogene Nm23-M2 by cytokines via phosphoinositide 3-kinase signaling. (Article)</title>
      <link>http://repub.eur.nl/res/pub/13449/</link>
      <pubDate>2004-09-10T00:00:00Z</pubDate>
      <description>The expansion and differentiation of hematopoietic progenitors is
      regulated by cytokine and growth factor signaling. To examine how signal
      transduction controls the gene expression program required for progenitor
      expansion, we screened ATLAS filters with polysome-associated mRNA derived
      from erythroid progenitors stimulated with erythropoietin and/or stem cell
      factor. The putative proto-oncogene nucleoside diphosphate kinase B
      (ndpk-B or nm23-M2) was identified as an erythropoietin and stem cell
      factor target gene. Factor-induced expression of nm23-M2 was regulated
      specifically at the level of polysome association by a phosphoinositide
      3-kinase-dependent mechanism. Identification of the transcription
      initiation site revealed that nm23-M2 mRNA starts with a terminal
      oligopyrimidine sequence, which is known to render mRNA translation
      dependent on mitogenic factors. Recently, the nm23-M2 locus was identified
      as a common leukemia retrovirus integration site, suggesting that it plays
      a role in leukemia development. The expression of Nm23 from a retroviral
      vector in the absence of its 5'-untranslated region caused constitutive
      polysome association of nm23-M2. Polysome-association and protein
      expression of endogenous nm23-M2 declined during differentiation of
      erythroid progenitors, suggesting a role for Nm23-M2 in progenitor
      expansion. Taken together, nm23-m2 exemplifies that cytokine-dependent
      control of translation initiation is an important mechanism of gene
      expression regulation.</description>
    </item> <item>
      <title>Dynamics of protein binding to telomeres in living cells: implications for telomere structure and function. (Article)</title>
      <link>http://repub.eur.nl/res/pub/13408/</link>
      <pubDate>2004-06-01T00:00:00Z</pubDate>
      <description>Telomeric proteins have an essential role in the regulation of the length
      of the telomeric DNA tract and in protection against end-to-end chromosome
      fusion. Telomere organization and how individual proteins are involved in
      different telomere functions in living cells is largely unknown. By using
      green fluorescent protein tagging and photobleaching, we investigated in
      vivo interactions of human telomeric DNA-binding proteins with telomeric
      DNA. Our results show that telomeric proteins interact with telomeres in a
      complex dynamic fashion: TRF2, which has a dual role in chromosome end
      protection and telomere length homeostasis, resides at telomeres in two
      distinct pools. One fraction ( approximately 73%) has binding dynamics
      similar to TRF1 (residence time of approximately 44 s). Interestingly, the
      other fraction of TRF2 binds with similar dynamics as the putative
      end-protecting factor hPOT1 (residence time of approximately 11 min). Our
      data support a dynamic model of telomeres in which chromosome
      end-protection and telomere length homeostasis are governed by
      differential binding of telomeric proteins to telomeric DNA.</description>
    </item> <item>
      <title>Tyrosine kinase receptor RON functions downstream of the erythropoietin (Article)</title>
      <link>http://repub.eur.nl/res/pub/8156/</link>
      <pubDate>2004-01-01T00:00:00Z</pubDate>
      <description>Erythropoietin (EPO) is required for cell survival during differentiation
      and for progenitor expansion during stress erythropoiesis. Although
      signaling pathways may couple directly to docking sites on the EPO
      receptor (EpoR), additional docking molecules expand the signaling
      platform of the receptor. We studied the roles of the docking molecules
      Grb2-associated binder-1 (Gab1) and Gab2 in EPO-induced signal
      transduction and erythropoiesis. Inhibitors of phosphatidylinositide
      3-kinase and Src kinases suppressed EPO-dependent phosphorylation of Gab2.
      In contrast, Gab1 activation depends on recruitment and phosphorylation by
      the tyrosine kinase receptor RON, with which it is constitutively
      associated. RON activation induces the phosphorylation of Gab1,
      mitogen-activated protein kinase (MAPK), and protein kinase B (PKB) but
      not of signal transducer and activator of transcription 5 (Stat5). RON
      activation was sufficient to replace EPO in progenitor expansion but not
      in differentiation. In conclusion, we elucidated a novel mechanism
      specifically involved in the expansion of erythroblasts involving RON as a
      downstream target of the EpoR</description>
    </item> <item>
      <title>The peripheral cannabinoid receptor Cb2, frequently expressed on AML blasts, either induces a neutrophilic differentiation block or confers abnormal migration properties in a ligand-dependent manner (Article)</title>
      <link>http://repub.eur.nl/res/pub/8184/</link>
      <pubDate>2004-01-01T00:00:00Z</pubDate>
      <description>Cb2, the gene encoding the peripheral cannabinoid receptor, is located in
      a common virus integration site and is overex-pressed in retrovirally
      induced murine myeloid leukemias. Here we show that this G protein-coupled
      receptor (GPCR) is also aberrantly expressed in a high percentage of human
      acute myeloid leukemias. We investigated the mechanism of transformation
      by Cb2 and demonstrate that aberrant expression of this receptor on
      hematopoietic precursor cells results in distinct effects depending on the
      ligand used. Cb2-expressing myeloid precursors migrate upon stimulation by
      the endocannabinoid 2-arachidonoylglycerol and are blocked in neutrophilic
      differentiation upon exposure to another ligand, CP55940. Both effects
      depend on the activation of G(alphai) proteins and require the
      mitogen-induced extracellular kinase/extracellular signal-regulated kinase
      (MEK/ERK) pathway. Down-regulation of cyclic adenosine monophosphate
      (cAMP) levels upon G(alphai) activation is important for migration
      induction but is irrelevant for the maturation arrest. Moreover, the
      highly conserved G protein-interacting DRY motif, present in the second
      intracellular loop of GPCRs, is critical for migration but unimportant for
      the differentiation block. This suggests that the Cb2-mediated
      differentiation block requires interaction of G(alphai) proteins with
      other currently unknown motifs. This indicates a unique mechanism by which
      a transforming GPCR, in a ligand-dependent manner, causes 2 distinct
      oncogenic effects: altered migration and block of neutrophilic
      development.</description>
    </item> <item>
      <title>FoxO3a regulates erythroid differentiation and induces BTG1, an activator of protein arginine methyl transferase 1 (Article)</title>
      <link>http://repub.eur.nl/res/pub/8361/</link>
      <pubDate>2004-01-01T00:00:00Z</pubDate>
      <description>Erythropoiesis requires tight control of expansion, maturation, and
      survival of erythroid progenitors. Because activation of
      phosphatidylinositol-3-kinase (PI3K) is required for erythropoietin/stem
      cell factor-induced expansion of erythroid progenitors, we examined the
      role of the PI3K-controlled Forkhead box, class O (FoxO) subfamily of
      Forkhead transcription factors. FoxO3a expression and nuclear accumulation
      increased during erythroid differentiation, whereas untimely induction of
      FoxO3a activity accelerated differentiation of erythroid progenitors to
      erythrocytes. We identified B cell translocation gene 1
      (BTG1)/antiproliferative protein 2 as a FoxO3a target gene in erythroid
      progenitors. Promoter studies indicated BTG1 as a direct target of FoxO3a.
      Expression of BTG1 in primary mouse bone marrow cells blocked the
      outgrowth of erythroid colonies, which required a domain of BTG1 that
      binds protein arginine methyl transferase 1. During erythroid
      differentiation, increased arginine methylation coincided with BTG1
      expression. Concordantly, inhibition of methyl transferase activity
      blocked erythroid maturation without affecting expansion of progenitor
      cells. We propose FoxO3a-controlled expression of BTG1 and subsequent
      regulation of protein arginine methyl transferase activity as a novel
      mechanism controlling erythroid expansion and differentiation.</description>
    </item> <item>
      <title>Prognostically useful gene-expression profiles in acute myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/8461/</link>
      <pubDate>2004-01-01T00:00:00Z</pubDate>
      <description>BACKGROUND: In patients with acute myeloid leukemia (AML) a combination of
      methods must be used to classify the disease, make therapeutic decisions,
      and determine the prognosis. However, this combined approach provides
      correct therapeutic and prognostic information in only 50 percent of
      cases. METHODS: We determined the gene-expression profiles in samples of
      peripheral blood or bone marrow from 285 patients with AML using
      Affymetrix U133A GeneChips containing approximately 13,000 unique genes or
      expression-signature tags. Data analyses were carried out with Omniviz,
      significance analysis of microarrays, and prediction analysis of
      microarrays software. Statistical analyses were performed to determine the
      prognostic significance of cases of AML with specific molecular
      signatures. RESULTS: Unsupervised cluster analyses identified 16 groups of
      patients with AML on the basis of molecular signatures. We identified the
      genes that defined these clusters and determined the minimal numbers of
      genes needed to identify prognostically important clusters with a high
      degree of accuracy. The clustering was driven by the presence of
      chromosomal lesions (e.g., t(8;21), t(15;17), and inv(16)), particular
      genetic mutations (CEBPA), and abnormal oncogene expression (EVI1). We
      identified several novel clusters, some consisting of specimens with
      normal karyotypes. A unique cluster with a distinctive gene-expression
      signature included cases of AML with a poor treatment outcome.
      CONCLUSIONS: Gene-expression profiling allows a comprehensive
      classification of AML that includes previously identified genetically
      defined subgroups and a novel cluster with an adverse prognosis.</description>
    </item> <item>
      <title>Interleukin-7 improves T-cell recovery after experimental T-cell-depleted bone marrow transplantation in T-cell-deficient mice by strong expansion of recent thymic emigrants (Article)</title>
      <link>http://repub.eur.nl/res/pub/8154/</link>
      <pubDate>2003-01-01T00:00:00Z</pubDate>
      <description>Interleukin-7 (IL-7) has been shown to enhance thymic output of newly
      developed T cells following bone marrow transplantation (BMT) in mice. In
      addition, IL-7 may affect peripheral expansion of T cells. In order to
      study the relative contribution of thymopoiesis versus peripheral T-cell
      expansion in the setting of compromised thymopoiesis, we have applied IL-7
      in an experimental stem cell transplantation model using T cell-deficient
      RAG-1(-/-) mice. C57BL/6 RAG-1(-/-) mice received transplants of syngeneic
      T-cell-depleted (TCD) bone marrow (Ly5.1) with or without supplemented T
      cells (Ly5.2). IL-7 was administered until day 63 after BMT. Peripheral
      blood T- and B-cell recovery was quantified by flow cytometry and
      thymopoiesis was studied by quantification of T-cell receptor
      rearrangement excision circles (TRECs). In mice receiving a T-cell-replete
      BMT, IL-7 selectively expanded mature CD45.2+ T cells without affecting
      the recovery of new bone marrow-derived CD45.1+ T cells. In contrast, IL-7
      significantly enhanced the recovery of bone marrow-derived T cells after
      TCD BMT. Quantification of TRECs in mice receiving a TCD BMT revealed that
      enhanced T-cell recovery following IL-7 treatment resulted from a strong
      expansion of newly developed naive T cells. These results suggest that
      peripheral expansion of recent thymic emigrants or mature T cells may be a
      preferential mechanism by which IL-7 enhances T-cell recovery after BMT</description>
    </item> <item>
      <title>Impaired recovery of Epstein-Barr virus (EBV)--specific CD8+ T lymphocytes after partially T-depleted allogeneic stem cell transplantation may identify patients at very high risk for progressive EBV reactivation and lymphoproliferative disease (Article)</title>
      <link>http://repub.eur.nl/res/pub/8227/</link>
      <pubDate>2003-01-01T00:00:00Z</pubDate>
      <description>Epstein-Barr virus (EBV)-specific cytotoxic T lymphocytes are considered
      pivotal to prevent lymphoproliferative disease (LPD) in allogeneic stem
      cell transplantation (SCT) recipients. We evaluated the recovery of
      EBV-specific CD8+ T cells after partially T-cell-depleted SCT and studied
      the interaction between EBV-specific CD8+ T cells, EBV reactivation, and
      EBV-LPD. EBV-specific CD8+ T cells were enumerated using 12 class I HLA
      tetramers presenting peptides derived from 7 EBV proteins. Blood samples
      were taken at regular intervals after SCT in 61 patients, and EBV DNA
      levels were assessed by real-time polymerase chain reaction. Forty-five
      patients showed EBV reactivation, including 25 with high-level
      reactivation (ie, more than 1000 genome equivalents [geq] per milliliter).
      Nine of these 25 patients progressed to EBV-LPD. CD8+ T cells specific for
      latent or lytic EBV epitopes repopulated the peripheral blood at largely
      similar rates. In most patients, EBV-specific CD8+ T-cell counts had
      returned to normal levels within 6 months after SCT. Concurrently, the
      incidence of EBV reactivations clearly decreased. Patients with
      insufficient EBV-specific CD8+ T-cell recovery were at high risk for EBV
      reactivation in the first 6 months after SCT. Failure to detect
      EBV-specific CD8+ T cells in patients with high-level reactivation was
      associated with the subsequent development of EBV-LPD (P =.048).
      Consequently, the earlier defined positive predictive value of
      approximately 40%, based on high-level EBV reactivation only, increased to
      100% in patients without detectable EBV-specific CD8+ T cells. Thus,
      impaired recovery of EBV-specific CD8+ T cells in patients with high-level
      EBV reactivation may identify a subgroup at very high risk for EBV-LPD and
      supports that EBV-specific CD8+ T cells protect SCT recipients from
      progressive EBV reactivation and EBV-LPD.</description>
    </item> <item>
      <title>High EVI1 expression predicts poor survival in acute myeloid leukemia: a study of 319 de novo AML patients (Article)</title>
      <link>http://repub.eur.nl/res/pub/8228/</link>
      <pubDate>2003-01-01T00:00:00Z</pubDate>
      <description>The proto-oncogene EVI1 encodes a DNA binding protein and is located on
      chromosome 3q26. The gene is aberrantly expressed in acute myeloid
      leukemia (AML) patients carrying 3q26 abnormalities. Two mRNAs are
      transcribed from this locus: EVI1 and a fusion of EVI1 with MDS1
      (MDS1-EVI1), a gene located 5' of EVI1. The purpose of this study was to
      investigate which of the 2 gene products is involved in transformation in
      human AML. To discriminate between EVI1 and MDS1-EVI1 transcripts,
      distinct real-time quantitative polymerase chain reaction (PCR) assays
      were developed. Patients with 3q26 abnormalities often showed high EVI1
      and MDS1-EVI1 expression. In a cohort of 319 AML patients, 4 subgroups
      could be distinguished: EVI1(+) and MDS1-EVI1(-) (6 patients; group I),
      EVI1(+) and MDS1-EVI1(+) (26 patients; group II), EVI1(-) and MDS1-EVI1(+)
      (12 patients; group III), and EVI1(-) and MDS1-EVI1(-) (275 patients;
      group IV). The only 4 patients with a 3q26 aberration belonged to groups I
      and II. Interestingly, high EVI1 and not MDS1-EVI1 expression was
      associated with unfavorable karyotypes (eg, -7/7q-) or complex karyotypes.
      Moreover, a significant correlation was observed between EVI1 expression
      and 11q23 aberrations (mixed lineage leukemia [MLL] gene involvement).
      Patients from groups I and II had significantly shorter overall and
      event-free survival than patients in groups III and IV. Our data
      demonstrate that high EVI1 expression is an independent poor prognostic
      marker within the intermediate- risk karyotypic group.</description>
    </item> <item>
      <title>Effect of priming with granulocyte colony-stimulating factor on the outcome of chemotherapy for acute myeloid leukemia (Article)</title>
      <link>http://repub.eur.nl/res/pub/8458/</link>
      <pubDate>2003-01-01T00:00:00Z</pubDate>
      <description>BACKGROUND: Sensitization of leukemic cells with hematopoietic growth
      factors may enhance the cytotoxicity of chemotherapy in acute myeloid
      leukemia (AML). METHODS: In a multicenter randomized trial, we assigned
      patients (age range, 18 to 60 years) with newly diagnosed AML to receive
      cytarabine plus idarubicin (cycle 1) and cytarabine plus amsacrin (cycle
      2) with granulocyte colony-stimulating factor (G-CSF) (321 patients) or
      without G-CSF (319). G-CSF was given concurrently with chemotherapy only.
      Idarubicin and amsacrin were given at the end of a cycle to allow the
      cell-cycle-dependent cytotoxicity of cytarabine in the context of G-CSF to
      have a greater effect. The effect of G-CSF on disease-free survival was
      assessed in all patients and in cytogenetically distinct prognostic
      subgroups. RESULTS: After induction chemotherapy, the rates of response
      were not significantly different in the two groups. After a median
      follow-up of 55 months, patients in complete remission after induction
      chemotherapy plus G-CSF had a higher rate of disease-free survival than
      patients who did not receive G-CSF (42 percent vs. 33 percent at four
      years, P=0.02), owing to a reduced probability of relapse (relative risk,
      0.77; 95 percent confidence interval, 0.61 to 0.99; P=0.04). G-CSF did not
      significantly improve overall survival (P=0.16). Although G-CSF did not
      improve the outcome in the subgroup with an unfavorable prognosis, the 72
      percent of patients with standard-risk AML benefited from G-CSF therapy
      (overall survival at four years, 45 percent, as compared with 35 percent
      in the group that did not receive G-CSF [relative risk of death, 0.75; 95
      percent confidence interval, 0.59 to 0.95; P=0.02]; disease-free survival,
      45 percent vs. 33 percent [relative risk, 0.70]; 95 percent confidence
      interval, 0.55 to 0.90; P=0.006). CONCLUSIONS: Sensitization of leukemic
      cells with growth factors is a clinically applicable means of enhancing
      the efficacy of chemotherapy in patients with AML.</description>
    </item> <item>
      <title>Prevention of Epstein-Barr virus-lymphoproliferative disease by molecular monitoring and preemptive rituximab in high-risk patients after allogeneic stem cell transplantation (Article)</title>
      <link>http://repub.eur.nl/res/pub/8169/</link>
      <pubDate>2002-01-01T00:00:00Z</pubDate>
      <description>Recipients of a partially T-cell-depleted (TCD) allogeneic stem cell transplantation (allo-SCT) developing reactivation of Epstein-Barr virus (EBV) with quantified viral DNA levels exceeding 1000 genome equivalents/milliliter (geq/mL) are at high risk for EBV-lymphoproliferative disease (EBV-LPD). We studied whether preemptive therapy with rituximab prevents EBV-LPD, LPD-mortality, and abrogates viral reactivation in high-risk patients. We monitored 49 recipients of a TCD allo-SCT weekly for EBV reactivation by quantitative real-time polymerase chain reaction (PCR). Preemptive therapy by a single infusion of rituximab was given to patients with viral reactivation more than or equal to 1000 geq/mL. Results were compared with an historical control group of patients retrospectively monitored for EBV reactivation at similar intervals. There were 17 prospectively monitored patients who showed EBV reactivation more than or equal to 1000 geq/mL and 15 received preemptive therapy. Median time to preemptive therapy was 113 days (range, 41-202 days) after SCT. There were 14 patients who showed complete response (CR) as characterized by prevention of EBV-LPD and complete clearance of EBV-DNA from plasma, which was achieved after a median number of 8 days (range, 1-46 days). One patient progressed to EBV-LPD despite preemptive therapy, but obtained CR after 2 infusions of rituximab and donor lymphocyte infusion. There were 2 patients who had already developed EBV-LPD prior to preemptive rituximab, but obtained CR following 2 rituximab infusions. Comparison of this prospectively followed series to our historical cohort with the same high-risk profile showed a reduction of EBV-LPD incidence (18% +/- 9% versus 49% +/- 11%, respectively) and a complete abrogation of LPD-mortality (0% versus 26% +/- 10%, respectively) (P =.04) at 6 months from EBV-DNA more than or equal to 1000 geq/mL. Frequent quantitative monitoring of EBV reactivation and preemptive therapy by rituximab improves outcome in patients at high risk of EBV-LPD.</description>
    </item> <item>
      <title>Hematopoietic cells expressing the peripheral cannabinoid receptor migrate in response to the endocannabinoid 2-arachidonoylglycerol (Article)</title>
      <link>http://repub.eur.nl/res/pub/8225/</link>
      <pubDate>2002-01-01T00:00:00Z</pubDate>
      <description>Cb2 is a novel protooncogene encoding the peripheral cannabinoid receptor.
      Previous studies demonstrated that 2 distinct noncoding first exons exist:
      exon-1A and exon-1B, which both splice to protein-coding exon-2. We
      demonstrate that in retrovirally induced murine myeloid leukemia cells
      with proviral insertion in Cb2, exon-1B/exon-2 Cb2 messenger RNA levels
      have been increased, resulting in high receptor numbers. In myeloid
      leukemia cells without virus insertion in this locus, low levels of only
      exon-1A/exon-2 Cb2 transcripts were present and receptors could not be
      detected. To elucidate the function of Cb2 in myeloid leukemia cells, a
      set of in vitro experiments was carried out using 32D/G-CSF-R (granulocyte
      colony-stimulating factor receptor) cells transfected with exon-1B/exon-2
      Cb2 complementary DNA and a myeloid cell line carrying a virus insertion
      in Cb2 (ie, NFS 78). We demonstrate that a major function of the Cb2
      receptor is stimulation of migration as determined in a transwell assay.
      Exposure of Cb2-expressing cells to different cannabinoids showed that the
      true ligand for Cb2 is 2-arachidonoylglycerol (2-AG), which may act as
      chemoattractant and as a chemokinetic agent. Furthermore, we observed a
      significant synergistic activity between 2-AG and interleukin-3 or G-CSF,
      suggesting cross-talk between the different receptor systems.
      Radioactive-ligand binding studies revealed significant numbers of Cb2
      receptors in normal spleen. Transwell experiments carried out with normal
      mouse spleen cells showed 2-AG-induced migration of B220-, CD19-,
      immunoglobulin M-, and immunoglobulin D-expressing B lymphocytes. Our
      study demonstrates that a major function of Cb2 receptor expressed on
      myeloid leukemia cells or normal splenocytes is stimulation of migration.</description>
    </item> <item>
      <title>Tetramer-based quantification of cytomegalovirus (CMV)-specific CD8+ T lymphocytes in T-cell-depleted stem cell grafts and after transplantation may identify patients at risk for progressive CMV infection (Article)</title>
      <link>http://repub.eur.nl/res/pub/8223/</link>
      <pubDate>2001-01-01T00:00:00Z</pubDate>
      <description>Recovery of cytomegalovirus (CMV)-specific T-cell-mediated immunity after
      allogeneic hematopoietic stem cell transplantation (SCT) is critical for
      protection against CMV disease. The study used fluorochrome-conjugated
      tetrameric complexes of HLA-A2 molecules loaded with the immunodominant
      NLVPMVATV (NLV) peptide derived from the CMV protein pp65 to quantify
      A2-NLV-specific CD8+ T cells in partially T-cell-depleted grafts
      administered to 27 HLA-A*0201+ patients and to monitor recovery of these T
      cells during the first 12 months after SCT. None of the 9 CMV-seronegative
      patients became infected with CMV, whereas 14 of 18 CMV-seropositive
      patients developed CMV antigenemia after SCT. CMV-seropositive recipients
      of grafts from CMV-seronegative donors required more preemptive treatment
      with ganciclovir (GCV) than those of grafts from CMV-seropositive donors
      (3 [1-6] versus 1 [0-3] courses, respectively; P =.009). The number of
      A2-NLV-specific CD8+ T cells in the grafts correlated inversely with the
      number of preemptive GCV courses administered (r = -0.61; P =.01). None of
      the 9 CMV-seronegative patients mounted a CMV-specific immune response as
      measured by monitoring A2-NLV-specific CD8+ T cells after SCT. Thirteen of
      14 CMV-seropositive patients without CMV disease recovered these T cells.
      In spite of preemptive GCV treatment, CMV disease developed in 4 patients,
      who all failed to recover A2-NLV-specific CD8+ T cells after SCT (P
          =.002). Thus, enumeration of HLA-restricted, CMV-specific CD8+ T cells in
      the grafts and monitoring of these T cells after SCT may constitute a
      rapid and sensitive tool to identify SCT recipients at risk for developing
      CMV disease.</description>
    </item> <item>
      <title>Epstein-Barr virus (EBV) reactivation is a frequent event after allogeneic stem cell transplantation (SCT) and quantitatively predicts EBV- lymphoproliferative disease following T-cell--depleted SCT (Article)</title>
      <link>http://repub.eur.nl/res/pub/8246/</link>
      <pubDate>2001-01-01T00:00:00Z</pubDate>
      <description>Reactivation of the Epstein-Barr virus (EBV) after allogeneic stem cell transplantation (allo-SCT) may evoke a protective cellular immune response or may be complicated by the development of EBV-lymphoproliferative disease (EBV-LPD). So far, very little is known about the incidence, recurrence, and sequelae of EBV reactivation following allo-SCT. EBV reactivation was retrospectively monitored in 85 EBV-seropositive recipients of a T-cell--depleted (TCD) allo-SCT and 65 EBV-seropositive recipients of an unmanipulated allo-SCT. Viral reactivation (more than 50 EBV genome equivalents [gEq]/mL) was monitored frequently by quantitative real-time plasma polymerase chain reaction until day 180 after SCT. Probabilities of developing viral reactivation were high after both unmanipulated and TCD-allogeneic SCT (31% +/- 6% versus 65% +/- 7%, respectively). A high CD34(+) cell number of the graft appeared as a novel significant predictor (P =.001) for EBV reactivation. Recurrent reactivation was observed more frequently in recipients of a TCD graft, and EBV-LPD occurred only after TCD-SCT. High-risk status, TCD, and use of antithymocyte globulin were predictive for developing EBV-LPD. Plasma EBV DNA quantitatively predicted EBV-LPD. The positive and negative predictive values of a viral load of 1000 gEq/mL were, respectively, 39% and 100% after TCD. Treatment-related mortality did not differ significantly between TCD and non-TCD transplants, but the incidence of chronic graft-versus-host disease was significantly less in TCD patients. It is concluded that EBV reactivation occurs frequently after TCD and unmanipulated allo-SCT, especially in recipients of grafts with high CD34(+) cell counts. EBV-LPD, however, occurred only after TCD, and EBV load quantitatively predicted EBV-LPD in recipients of a TCD graft. (Blood. 2001;98:972-978)</description>
    </item> <item>
      <title>Unrelated marrow transplantation for adult patients with poor-risk acute lymphoblastic leukemia: strong graft-versus-leukemia effect and risk factors determining outcome (Article)</title>
      <link>http://repub.eur.nl/res/pub/9603/</link>
      <pubDate>2001-01-01T00:00:00Z</pubDate>
      <description>Between 1988 and 1999, 127 patients with poor-risk acute lymphoblastic
          leukemia (ALL) received a matched unrelated donor transplant using marrow
          procured by National Marrow Donor Program (NMDP) collection centers and
          sent out to 46 transplant centers worldwide. Poor risk was defined by the
          presence of the translocations t(9;22) (n = 97), or t(4;11) (n = 25), or
          t(1;19) (n = 5). Sixty-four patients underwent transplantation in first
          remission (CR1), 16 in CR2 or CR3, and 47 patients had relapsed ALL or
          primary induction failure (PIF). Overall survival at 2 years from
          transplant was 40% for patients in CR1, 17% in CR2/3, and 5% in PIF or
          relapse. Treatment-related mortality (TRM) and relapse mortality,
          estimated as competing risk factors, were 54% and 6%, respectively, in
          CR1, 75% and 8% in CR2/3, and 64% and 31% in PIF or relapse. Currently 23
          CR1 patients are alive and free of disease with a median follow-up of 24
          months (range, 3-97). Multivariable analysis showed that CR1, shorter
          interval from diagnosis to transplantation, DRB1 match, negative
          cytomegalovirus (CMV) serology (patient and donor), and presence of the
          Philadelphia chromosome, t(9;22), were independently associated with
          better disease-free survival (DFS). Transplantation in CR and presence of
          t(9;22) were associated with lower risk of relapse. Shorter interval from
          diagnosis to transplantation, DRB1-match, negative CMV, higher marrow cell
          dose, and Karnofsky score of 90 or higher were associated with less TRM.
          These results indicate that, despite a relatively high TRM, the low
          relapse rate resulted in a 37% +/- 13% DFS for CR1 patients, comparing
          favorably to results obtained with chemotherapy alone and matching results
          following HLA-identical sibling transplantation.</description>
    </item> <item>
      <title>Rapid emergence of ciprofloxacin-resistant enterobacteriaceae containing multiple gentamicin resistance-associated integrons in a Dutch hospital (Article)</title>
      <link>http://repub.eur.nl/res/pub/9804/</link>
      <pubDate>2001-01-01T00:00:00Z</pubDate>
      <description>In a hematology unit in the Netherlands, the incidence of
      ciprofloxacin-resistant Enterobacter cloacae and Escherichia coli
      increased from from 1996 to 1999. Clonal spread of single genotypes of
      both ciprofloxacin-resistant E. coli and Enterobacter cloacae from patient
      to patient was documented by pulsed-field gel electrophoresis and random
      amplification of polymorphic DNA. In addition, genetically heterogeneous
      strains were isolated regularly. Integrons associated with gentamicin
      resistance were detected in Enterobacter cloacae and E. coli strains.
      Integron-containing E. coli were detected in all hematology wards. In
      contrast, in Enterobacter cloacae strains two integron types were
      encountered only in the isolates from one ward. Although in all patients
      identical antibiotic regimens were used for selective decontamination, we
      documented clear differences with respect to the nosocomial emergence of
      ciprofloxacin-resistant bacterial strains and gentamicin
      resistance-associated integrons.</description>
    </item> <item>
      <title>Protein kinase C alpha controls erythropoietin receptor signaling. (Article)</title>
      <link>http://repub.eur.nl/res/pub/12881/</link>
      <pubDate>2000-01-01T00:00:00Z</pubDate>
      <description>Protein kinase C (PKC) is implied in the activation of multiple targets of
          erythropoietin (Epo) signaling, but its exact role in Epo receptor (EpoR)
          signal transduction and in the regulation of erythroid proliferation and
          differentiation remained elusive. We analyzed the effect of PKC inhibitors
          with distinct modes of action on EpoR signaling in primary human
          erythroblasts and in a recently established murine erythroid cell line.
          Active PKC appeared essential for Epo-induced phosphorylation of the Epo
          receptor itself, STAT5, Gab1, Erk1/2, AKT, and other downstream targets.
          Under the same conditions, stem cell factor-induced signal transduction
          was not impaired. LY294002, a specific inhibitor of phosphoinositol
          3-kinase, also suppressed Epo-induced signal transduction, which could be
          partially relieved by activators of PKC. PKC inhibitors or LY294002 did
          not affect membrane expression of the EpoR, the association of JAK2 with
          the EpoR, or the in vitro kinase activity of JAK2. The data suggest that
          PKC controls EpoR signaling instead of being a downstream effector. PKC
          and phosphoinositol 3-kinase may act in concert to regulate association of
          the EpoR complex such that it is responsive to ligand stimulation. Reduced
          PKC-activity inhibited Epo-dependent differentiation, although it did not
          effect Epo-dependent "renewal divisions" induced in the presence of Epo,
          stem cell factor, and dexamethasone.</description>
    </item> <item>
      <title>Increased transplant-related morbidity and mortality in CMV-seropositive patients despite highly effective prevention of CMV disease after allogeneic T-cell-depleted stem cell transplantation (Article)</title>
      <link>http://repub.eur.nl/res/pub/9294/</link>
      <pubDate>2000-01-01T00:00:00Z</pubDate>
      <description>We evaluated the efficacy, toxicity, and outcome of preemptive ganciclovir
          (GCV) therapy in 80 cytomegalovirus (CMV)-seropositive patients
          allografted between 1991 and 1996 and compared their outcome to 35
          seronegative patients allografted during the same period. Both cohorts
          were comparable with respect to diagnosis and distribution of high- versus
          standard-risk patients. All patients received a stem cell graft from an
          HLA-identical sibling donor, and grafts were partially depleted of T cells
          in 109 patients. Patients were monitored for CMV antigenemia by leukocyte
          expression of the CMV-pp65 antigen. Fifty-two periods of CMV reactivation
          occurring in 30 patients were treated preemptively with GCV. A favorable
          response was observed in 48 of 50 periods, and only 2 patients developed
          CMV disease: 1 with esophagitis and 1 with pneumonia. Ten of 30 treated
          patients developed GCV-related neutropenia (less than 0.5 x 10(9)/L),
          which was associated with a high bilirubin at the start of GCV therapy.
          Overall survival at 5 years was 64% in the CMV-seronegative cohort and 40%
          in the CMV-seropositive cohort (P =.01). Increased treatment-related
          mortality accounted for inferior survival. CMV seropositivity proved an
          independent risk factor for developing acute graft-versus-host disease,
          and acute graft-versus-host disease predicted for higher treatment-related
          mortality and worse overall survival in a time-dependent analysis. We
          conclude that, although CMV disease can effectively be prevented by
          preemptive GCV therapy, CMV seropositivity remains a strong adverse risk
          factor for survival following partial T-cell-depleted allogeneic stem cell
          transplantation.</description>
    </item> <item>
      <title>Stem cell factor induces phosphatidylinositol 3'-kinase-dependent Lyn/Tec/Dok-1 complex formation in hematopoietic cells (Article)</title>
      <link>http://repub.eur.nl/res/pub/9530/</link>
      <pubDate>2000-01-01T00:00:00Z</pubDate>
      <description>Stem cell factor (SCF) has an important role in the proliferation,
          differentiation, survival, and migration of hematopoietic cells. SCF
          exerts its effects by binding to cKit, a receptor with intrinsic tyrosine
          kinase activity. Activation of phosphatidylinositol 3'-kinase (PI3-K) by
          cKit was previously shown to contribute to many SCF-induced cellular
          responses. Therefore, PI3-K-dependent signaling pathways activated by SCF
          were investigated. The PI3-K-dependent activation and phosphorylation of
          the tyrosine kinase Tec and the adapter molecule p62Dok-1 are reported.
          The study shows that Tec and Dok-1 form a stable complex with Lyn and 2
          unidentified phosphoproteins of 56 and 140 kd. Both the Tec homology and
          the SH2 domain of Tec were identified as being required for the
          interaction with Dok-1, whereas 2 domains in Dok-1 appeared to mediate the
          association with Tec. In addition, Tec and Lyn were shown to phosphorylate
          Dok-1, whereas phosphorylated Dok-1 was demonstrated to bind to the SH2
          domains of several signaling molecules activated by SCF, including Abl,
          CrkL, SHIP, and PLCgamma-1, but not those of Vav and Shc. These findings
          suggest that p62Dok-1 may function as an important scaffold molecule in
          cKit-mediated signaling.</description>
    </item> <item>
      <title>Retroviral insertions in Evi12, a novel common virus integration site upstream of Tra1/Grp94, frequently coincide with insertions in the gene encoding the peripheral cannabinoid receptor Cnr2 (Article)</title>
      <link>http://repub.eur.nl/res/pub/9072/</link>
      <pubDate>1999-01-01T00:00:00Z</pubDate>
      <description>The common virus integration site (VIS) Evi11 was recently identified
      within the gene encoding the hematopoietic G-protein-coupled peripheral
      cannabinoid receptor Cnr2 (also referred to as Cb2). Here we show that
      Cnr2 is a frequent target (12%) for insertion of Cas-Br-M murine leukemia
      virus (MuLV) in primary tumors in NIH/Swiss mice. Multiple provirus
      insertions in Evi11 were cloned and shown to be located within the 3'
      untranslated region of the candidate proto-oncogene Cnr2. These results
      suggest that proviral insertion in the Cnr2 gene is an important step in
      Cas-Br-M MuLV-induced leukemogenesis in NIH/Swiss mice. To isolate
      Evi11/Cnr2 collaborating proto-oncogenes, we searched for novel common
      VISs in the Cas-Br-M MuLV-induced primary tumors and identified a novel
      frequent common VIS, Evi12 (14%). Interestingly, 54% of the
      Evi11/Cnr2-rearranged primary tumors contained insertions in Evi12 as
      well, which suggests cooperative action of the target genes in these two
      common VISs in leukemogenesis. By interspecific backcross analysis it was
      shown that Evi12 resides on mouse chromosome 10 in a region that shares
      homology with human chromosomes 12q and 19p. Sequence analysis
      demonstrated that Evi12 is located upstream of the gene encoding the
      molecular chaperone Tra1/Grp94, which was previously mapped to mouse
      chromosome 10 and human chromosome 12q22-24. Thus, Tra1/Grp94 is a
      candidate target gene for retroviral activation or inactivation in Evi12.
      However, Northern and Western blot analyses did not provide evidence that
      proviral insertion had altered the expression of Tra1/Grp94. Additional
      studies are required to determine whether Tra1/Grp94 or another candidate
      proto-oncogene in Evi12 is involved in leukemogenesis.</description>
    </item> <item>
      <title>Complete remission of t(11;17) positive acute promyelocytic leukemia induced by all-trans retinoic acid and granulocyte colony-stimulating factor (Article)</title>
      <link>http://repub.eur.nl/res/pub/9124/</link>
      <pubDate>1999-01-01T00:00:00Z</pubDate>
      <description>The combined use of retinoic acid and chemotherapy has led to an important
          improvement of cure rates in acute promyelocytic leukemia. Retinoic acid
          forces terminal maturation of the malignant cells and this application
          represents the first generally accepted differentiation-based therapy in
          leukemia. Unfortunately, similar approaches have failed in other types of
          hematological malignancies suggesting that the applicability is limited to
          this specific subgroup of patients. This has been endorsed by the
          notorious lack of response in acute promyelocytic leukemia bearing the
          variant t(11;17) translocation. Based on the reported synergistic effects
          of retinoic acid and the hematopoietic growth factor granulocyte
          colony-stimulating factor (G-CSF), we studied maturation of t(11;17)
          positive leukemia cells using several combinations of retinoic acid and
          growth factors. In cultures with retinoic acid or G-CSF the leukemic cells
          did not differentiate into mature granulocytes, but striking granulocytic
          differentiation occurred with the combination of both agents. At relapse,
          the patient was treated with retinoic acid and G-CSF before reinduction
          chemotherapy. With retinoic acid and G-CSF treatment alone, complete
          granulocytic maturation of the leukemic cells occurred in vivo, followed
          by a complete cytogenetical and hematological remission. Bone marrow and
          blood became negative in fluorescense in situ hybridization analysis and
          semi-quantitative polymerase chain reaction showed a profound reduction of
          promyelocytic leukemia zinc finger-retinoic acid receptor-alpha fusion
          transcripts. This shows that t(11;17) positive leukemia cells are not
          intrinsically resistant to retinoic acid, provided that the proper
          costimulus is administered. These observations may encourage the
          investigation of combinations of all-trans retinoic acid and hematopoietic
          growth factors in other types of leukemia.</description>
    </item> <item>
      <title>The glucocorticoid receptor cooperates with the erythropoietin receptor and c-Kit to enhance and sustain proliferation of erythroid progenitors in vitro (Article)</title>
      <link>http://repub.eur.nl/res/pub/9135/</link>
      <pubDate>1999-01-01T00:00:00Z</pubDate>
      <description>Although erythropoietin (Epo) is essential for the production of mature
          red blood cells, the cooperation with other factors is required for a
          proper balance between progenitor proliferation and differentiation. In
          avian erythroid progenitors, steroid hormones cooperate with tyrosine
          kinase receptors to induce renewal of erythroid progenitors. We examined
          the role of corticosteroids in the in vitro expansion of primary human
          erythroid cells in liquid cultures and colony assays. Dexamethasone (Dex),
          a synthetic glucocorticoid hormone, cooperated with Epo and stem cell
          factor to induce erythroid progenitors to undergo 15 to 22 cell divisions,
          corresponding to a 10(5)- to 10(6)-fold amplification of erythroid cells.
          Dex acted directly on erythroid progenitors and maintained the
          colony-forming capacity of the progenitor cells expanded in liquid
          cultures. The hormone delayed terminal differentiation into erythrocytes,
          which was assayed by morphology, hemoglobin accumulation, and the
          expression of genes characteristic for immature cells. Sustained
          proliferation of erythroid progenitors could be induced equally well from
          purified erythroid burst-forming units (BFU-E), from CD34(+) blast cells,
          and from bone marrow depleted from CD34(+) cells.</description>
    </item> <item>
      <title>TRIADs: a new class of proteins with a novel cysteine-rich signature (Article)</title>
      <link>http://repub.eur.nl/res/pub/9139/</link>
      <pubDate>1999-01-01T00:00:00Z</pubDate>
      <description>Triad1 was recently identified as a nuclear RING finger protein, which is
          up-regulated during retinoic acid induced granulocytic differentiation of
          acute leukemia cells. Here we show that a cysteine-rich domain (C6HC),
          present in Triad1, is conserved in at least 24 proteins encoded by various
          eukaryotes. The C6HC consensus pattern
          C-x(4)-C-x(14-30)-C-x(1-4)-C-x(4)-C-x(2)-C-x(4)-H-x(4)-C defines this
          structure as the fourth family member of the zinc-binding RING, LIM, and
          LAP/PHD fingers. Strikingly, in 22 of 24 proteins the C6HC domain is
          flanked by two RING finger structures. We have termed the novel C6HC motif
          DRIL (double RING finger linked). The strong conservation of the larger
          tripartite TRIAD (two RING fingers and DRIL) structure indicates that the
          three subdomains are functionally linked and identifies a novel class of
          proteins.</description>
    </item> <item>
      <title>An in vitro model for cytogenetic conversion in CML. Interferon-alpha preferentially inhibits the outgrowth of malignant stem cells preserved in long-term culture (Article)</title>
      <link>http://repub.eur.nl/res/pub/8894/</link>
      <pubDate>1998-01-01T00:00:00Z</pubDate>
      <description>IFN-alpha has been shown to prolong survival in chronic myeloid leukemia
          patients, but its mechanism of action is still not understood. The human
          cobblestone area-forming cell (CAFC) assay allows for the measurement of
          the concentration of normal as well as malignant stem cells, while their
          progeny can be measured in parallel long-term culture (LTC) in flasks.
          Using CAFC and LTC assays, we have examined direct effects of IFN-alpha
          (500; 5,000 IU/ml) on the maintenance and outgrowth of CD34-enriched
          normal and malignant stem cells, obtained from six patients with an
          established major cytogenetic response to IFN-alpha and from four
          nonresponding patients. CAFC concentrations were not affected by
          IFN-alpha. In contrast, IFN-alpha strongly inhibited the clonogenic output
          in flask LTC. Nucleated cells (NC) produced in LTC were evaluated by
          fluorescent in situ hybridization (FISH) for the presence of the
          Philadelphia (Ph) translocation. After 8 wk of LTC, the percentage of Ph+
          NCs produced was significantly more inhibited by IFN-alpha in responding
          patients than in nonresponders. Control LTC without IFN-alpha showed no
          significant differences of Ph+ NC production between responders and
          nonresponders. These findings provide the first in vitro model for
          cytogenetic conversion and suggest that direct antiproliferative effects
          of IFN-alpha account for the cytogenetic response observed clinically.</description>
    </item> <item>
      <title>The genes encoding the peripheral cannabinoid receptor and alpha-L-fucosidase are located near a newly identified common virus integration site, Evi11 (Article)</title>
      <link>http://repub.eur.nl/res/pub/8711/</link>
      <pubDate>1997-01-01T00:00:00Z</pubDate>
      <description>A new common region of virus integration, Evi11, has been identified in
          two retrovirally induced murine myeloid leukemia cell lines, NFS107 and
          NFS78. By interspecific backcross analysis, it was shown that Evi11 is
          located at the distal end of mouse chromosome 4, in a region that shows
          homology with human 1p36. The genes encoding the peripheral cannabinoid
          receptor (Cnr2) and alpha-L-fucosidase (Fuca1) were identified near the
          integration site by using a novel exon trapping system. Cnr2 is suggested
          to be the target gene for viral interference in Evi11, since proviruses
          are integrated in the first intron of Cnr2 and retroviral integrations
          alter mRNA expression of Cnr2 in NFS107 and NFS78. In addition, proviral
          integrations were demonstrated within the 3' untranslated region of Cnr2
          in five independent newly derived CasBrM-MuLV (mouse murine leukemia
          virus) tumors, CSL13, CSL14, CSL16, CSL27, and CSL97. The Cnr2 gene
          encodes a seven-transmembrane G-protein-coupled receptor which is normally
          expressed in hematopoietic tissues. Our data suggest that the peripheral
          cannabinoid receptor gene might be involved in leukemogenesis as a result
          of aberrant expression of Cnr2 due to retroviral integration in Evi11.</description>
    </item> <item>
      <title>A rapid RT-PCR based method to isolate complementary DNA fragments flanking retrovirus integration sites (Article)</title>
      <link>http://repub.eur.nl/res/pub/8724/</link>
      <pubDate>1997-01-01T00:00:00Z</pubDate>
      <description>Proto-oncogenes in retrovirally induced myeloid mouse leukemias are
          frequently activated following retroviral insertion. The identification of
          common virus integration sites (VISs) and isolation of the transforming
          oncogene is laborious and time consuming. We established a rapid and
          simple PCR based procedure which facilitates the identification of VISs
          and novel proto-oncogenes. Complementary DNA fragments adjacent to
          retrovirus integration sites were selectively isolated by applying a
          reverse transcriptase (RT) reaction using an oligo(dT)-adaptor primer,
          followed by PCR using the adaptor sequence and a retrovirus long terminal
          repeat (LTR) specific primer. Multiple chimeric cDNA fragments suitable
          for Southern and northern blot analysis were isolated.</description>
    </item> <item>
      <title>Molecular epidemiology of apparent outbreak of invasive aspergillosis in ahematology ward (Article)</title>
      <link>http://repub.eur.nl/res/pub/8633/</link>
      <pubDate>1996-01-01T00:00:00Z</pubDate>
      <description>During a 2-month period, five patients suffering from invasive infections
          caused by Aspergillus flavus or Aspergillus fumigatus were identified in
          the Hematology Department of the University Hospital Dijkzigt (Rotterdam,
          The Netherlands). To study the epidemiological aspects of invasive
          aspergillosis, strains from these patients and from the hospital
          environment, isolated during extensive microbiological screening, were
          subjected to genotyping. A novel DNA extraction technique, involving
          freezing, grinding, and direct lysis in guanidium
          isothiocyanate-containing buffers of mycelial material, was applied. DNA
          isolation was followed by typing by random amplification of polymorphic
          DNA (RAPD) analysis. This showed that strains isolated from all patients
          infected with the same fungal species were genotypically distinct, thus
          providing evidence against the possibility of an ongoing, single-source
          nosocomial outbreak. Strains could also be differentiated from strains of
          geographically diverse origins. However, an A. flavus strain from one of
          the patients was also frequently encountered in the hospital environment.
          As all environmental strains were collected after this patient had been
          diagnosed with invasive disease, the epidemiological value of this
          observation could not be ascertained. Intensive investigations showed no
          single source of A. flavus or other aspergilli. RAPD genotyping proved
          that the outbreak of invasive aspergillosis in the hematology ward</description>
    </item> <item>
      <title>Mutations in the gene for the granulocyte colony-stimulating-factor receptor in patients with acute myeloid leukemia preceded by severe congenital neutropenia (Article)</title>
      <link>http://repub.eur.nl/res/pub/8534/</link>
      <pubDate>1995-01-01T00:00:00Z</pubDate>
      <description>BACKGROUND. In severe congenital neutropenia the maturation of myeloid
          progenitor cells is arrested. The myelodysplastic syndrome and acute
          myeloid leukemia develop in some patients with severe congenital
          neutropenia. Abnormalities in the signal-transduction pathways for
          granulocyte colony-stimulating factor (G-CSF) may play a part in the
          progression to acute myeloid leukemia. METHODS. We isolated genomic DNA
          and RNA from hematopoietic cells obtained from two patients with acute
          myeloid leukemia and histories of severe congenital neutropenia. The
          nucleotide sequences encoding the cytoplasmic domain of the G-CSF receptor
          were amplified by means of the polymerase chain reaction and sequenced.
          Murine myeloid 32D.C10 cells were transfected with complementary DNA
          encoding the wild-type or mutant G-CSF receptors and tested for their
          responses to G-CSF. RESULTS. Point mutations in the gene for the G-CSF
          receptor were identified in both patients. The mutations, a substitution
          of thymine for cytosine at the codon for glutamine at position 718
          (Gln718) in one patient and at the codon for glutamine at position
          731(Gln731) in the other, caused a truncation of the C-terminal
          cytoplasmic region of the receptor. Both mutant and wild-type genes for
          the G-CSF receptor were present in leukemic cells from the two patients.
          In one patient, the mutation was also found in the neutropenic stage,
          before the progression to acute myeloid leukemia. The 32D.C10 cells
          expressing mutant receptors had abnormally high proliferative responses
          but failed to mature when cultured in G-CSF. The mutant G-CSF receptors
          also interfered with terminal maturation mediated by the wild-type G-CSF
          receptor in the 32D.C10 cells that coexpressed the wild-type and mutant
          receptors. CONCLUSIONS. Mutations in the gene for the G-CSF receptor that
          interrupt signals required for the maturation of myeloid cells are
          involved in the pathogenesis of severe congenital neutropenia and
          associated with the progression to acute myeloid leukemia.</description>
    </item> <item>
      <title>Cost-effectiveness of autologous bone marrow transplantation in comparison to conventional chemotherapy in patients with non-Hodgkin's lymphoma (Research Paper)</title>
      <link>http://repub.eur.nl/res/pub/1314/</link>
      <pubDate>1994-01-01T00:00:00Z</pubDate>
      <description>A prospective randomized clinical trial with simultaneous data collection for an economic appraisal was carried out to assess the effectiveness, quality of life and cost implications of ABMT vs standard chemotherapy in slowly responding patients with intermediate- and high-grade malignant non-Hodgkin's lymphoma (NHL). The patients had a partial response after three cycles of chemotherapy and had no evidence of BM involvement of NHL. The overall and disease-free survival at 3 years were 61% and 60%, respectively, in the ABMT group and 85% and 77% in the CHOP group (P = NS). Moreover, there were more (severe) complications and symptoms in the ABMT than in the CHOP group. The average costs of CHOP chemotherapy were significantly lower than the average costs in the ABMT group (CHOP: US$ 3118 vs ABMT: US$ 34,447). Considering long-term consequences the ABMT group was more expensive (US$ 34,580) and patients experienced 0.14 life years and 0.22 quality adjusted life years less than the CHOP group (discount rate 5%). As a result, changing therapy from CHOP to ABMT, as primary treatment in slow responders to CHOP, can not be recommended as the required additional investment does not produce health gains in terms of survival or quality of life.</description>
    </item> <item>
      <title>Identification of a nonsense mutation in the granulocyte-colony-stimulating factor receptor in severe congenital neutropenia (Article)</title>
      <link>http://repub.eur.nl/res/pub/8531/</link>
      <pubDate>1994-01-01T00:00:00Z</pubDate>
      <description>Severe congenital neutropenia (Kostmann syndrome) is characterized by
          profound absolute neutropenia and a maturation arrest of marrow progenitor
          cells at the promyelocyte-myelocyte stage. Marrow cells from such patients
          frequently display a reduced responsiveness to
          granulocyte-colony-stimulating factor (G-CSF). G-CSF binds to and
          activates a specific receptor which transduces signals critical for the
          proliferation and maturation of granulocytic progenitor cells. Here we
          report the identification of a somatic point mutation in one allele of the
          G-CSF receptor gene in a patient with severe congenital neutropenia. The
          mutation results in a cytoplasmic truncation of the receptor. When
          expressed in murine myeloid cells, the mutant receptor transduced a strong
          growth signal but, in contrast to the wild-type G-CSF receptor, was
          defective in maturation induction. The mutant receptor chain may act in a
          dominant negative manner to block granulocytic maturation.</description>
    </item> <item>
      <title>Distinct cytoplasmic regions of the human granulocyte colony-stimulating factor receptor involved in induction of proliferation and maturation (Article)</title>
      <link>http://repub.eur.nl/res/pub/8594/</link>
      <pubDate>1993-01-01T00:00:00Z</pubDate>
      <description>The granulocyte colony-stimulating factor receptor (G-CSF-R) transduces
          signals important for the proliferation and maturation of myeloid
          progenitor cells. To identify functionally important regions in the
          cytoplasmic domain of the G-CSF-R, we compared the actions of the
          wild-type receptor, two mutants, and a natural splice variant in
          transfectants of the mouse pro-B cell line BAF3 and two myeloid cell
          lines, 32D and L-GM. A region of 55 amino acids adjacent to the
          transmembrane domain was found to be sufficient for generating a growth
          signal. The immediate downstream sequence of 30 amino acids substantially
          enhanced the growth signaling in the three cell lines. In contrast, the
          carboxy-terminal part of 98 amino acids strongly inhibited growth
          signaling in the two myeloid cell lines but not in BAF3 cells. Truncation
          of this region lead to an inability of the G-CSF-R to transduce maturation
          signals in L-GM cells. An alternative carboxy tail present in a splice
          variant of the G-CSF-R also inhibited growth signaling, notably in both
          the myeloid cells and BAF3 cells, but appeared not to be involved in
          maturation.</description>
    </item> <item>
      <title>Van de brug af gezien (Inaugural Lecture)</title>
      <link>http://repub.eur.nl/res/pub/7404/</link>
      <pubDate>1991-05-23T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>Chronic myeloid leukemia with permanent disappearance of the Ph1 chromosome and development of new clonal subpopulations. (Article)</title>
      <link>http://repub.eur.nl/res/pub/26816/</link>
      <pubDate>1979-01-01T00:00:00Z</pubDate>
      <description></description>
    </item> <item>
      <title>Influence of interferon preparations on the proliferative capacity of human and mouse bone marrow cells in vitro (Article)</title>
      <link>http://repub.eur.nl/res/pub/26815/</link>
      <pubDate>1978-01-01T00:00:00Z</pubDate>
      <description>The toxicity of interferon to bone marrow was studied by the use of in vitro colony forming assays for hemopoietic cells. In the same study the relative inhibitory effects of two clinically common interferon preparations, leukocyte and fibroblast interferons, were compared with regard to their effect on both myeloid [colony-forming unit, culture (CFUc)] and erythroid [colony-forming unit, erythroid (CFUe)] progenitor cells. CFUe formation in human bone marrow cells in vitro appeared to be fairly resistant to both interferons. Only high doses of both interferons gave a marked inhibition of CFUe. However, the toxicity of leukocyte and fibroblast interferon was divergent for CFUe in human bone marrow. Leukocyte interferon appeared to be considerably more inhibitory for CFUe than was fibroblast interferon. The effects of mouse interferon, induced in L929 cells, on the growth of CFUc and CFUe in murine bone marrow cells were comparable with those of fibroblast interferon on human cells. The toxicity of human and murine interferon was species specific. Except for the toxicity of leukocyte interferon to CFUc in human bone marrow, the toxicity of interferon was marked only with concentrations on interferon far exceeding the amount necessary to produce an antiviral state in vitro.</description>
    </item> <item>
      <title>Fetal liver cell transplantation : role and nature of the fetal haemopoietic stem cell (Doctoral Thesis)</title>
      <link>http://repub.eur.nl/res/pub/31320/</link>
      <pubDate>1975-01-29T00:00:00Z</pubDate>
      <description>Fetal liver cell transplantation deserves intensified interest because, according to
previous experimental evidence, it may represent a useful approach to reduce or
avoid severe Graft-versus-Host (GvH) reactions following treatment with allogeneic
haemopoietic cell grafts. The application of fetal liver cells in man has not been very
successful so far. The present investigation in the mouse was concerned with the
practical issues of elucidating the causes for the repeated failures of fetal liver cell
grafting in patients and of establishing the applicability and limitations of these
grafts. This study also had interesting physiological aspects. It allowed us to investigate
the specific growth properties of the embryonic haemopoietic stem cells (HSC) and
to add information to our incomplete knowledge of factors controlling the differentiation
and proliferation of these cells</description>
    </item>
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