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    <title>Sweep, F.C.</title>
    <link>http://repub.eur.nl/res/aut/4733/</link>
    <description>List of Publications</description>
    <language>en</language>
    <image>
      <url>http://repub.eur.nl/static-eur/img/logo.png</url>
      <title>RePub, Erasmus University Rotterdam</title>
      <link>http://repub.eur.nl</link>
    </image>
    <item>
      <title>Clinical utility of level-of-evidence-1 disease forecast cancer biomarkers uPA and its inhibitor PAI-1 (Article)</title>
      <link>http://repub.eur.nl/res/pub/33015/</link>
      <pubDate>2010-11-01T00:00:00Z</pubDate>
      <description>The prognostic and/or predictive value of the cancer biomarkers, urokinase-type plasminogen activator (uPA) and its inhibitor (plasminogen activator inhibitor [PAI]-1), determined by ELISA in tumor-tissue extracts, was demonstrated for several cancer types in numerous clinically relevant retrospective or prospective studies, including a multicenter breast cancer therapy trial (Chemo-N0). Consequently, for the first time ever for any cancer biomarker for breast cancer, uPA and PAI-1 have reached the highest level of evidence, level-of-evidence-1. At present, two other breast cancer therapy trials, NNBC-3 and Plan B, also incorporating uPA and PAI-1 as treatment-assignment tools are in effect. Furthermore, small synthetic molecules targeting uPA are currently in Phase II clinical trials in patients afflicted with advanced cancer of the ovary, breast or pancreas. </description>
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      <title>Application of tumour markers in clinical practice [Toepassing van tumormarkers in de klinische praktijk] (Article)</title>
      <link>http://repub.eur.nl/res/pub/19556/</link>
      <pubDate>2010-01-01T00:00:00Z</pubDate>
      <description>Serum-tumour markers are molecules that are used frequently for diagnosis and treatment of malignancy. The present paper informs the reader about the use and limitations of common serum-tumour markers. We describe the use of serum-tumour markers for screening, diagnosis, staging and prognostic evaluation, detection of recurrence and treatment monitoring. Overall, the common serum-tumour markers are poorly sensitive and specific for screening in an asymptomatic population. The benefits of an improved prognosis by early detection should be weighted to the cost of substantial overdiagnosis and over-treatment. Serum-tumour markers often support the diagnostic process and give useful prognostic information. However, at present serum-tumour markers are above all applicable for treatment monitoring and detection of recurrence.</description>
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      <title>Methylated genes as new cancer biomarkers (Article)</title>
      <link>http://repub.eur.nl/res/pub/24328/</link>
      <pubDate>2009-02-01T00:00:00Z</pubDate>
      <description>Aberrant hypermethylation of promoter regions in specific genes is a key event in the formation and progression of cancer. In at least some situations, these aberrant alterations occur early in the formation of malignancy and appear to be tumour specific. Multiple reports have suggested that measurement of the methylation status of the promoter regions of specific genes can aid early detection of cancer, determine prognosis and predict therapy responses. Promising DNA methylation biomarkers include the use of methylated GSTP1 for aiding the early diagnosis of prostate cancer, methylated PITX2 for predicting outcome in lymph node-negative breast cancer patients and methylated MGMT in predicting benefit from alkylating agents in patients with glioblastomas. However, prior to clinical utilisation, these findings require validation in prospective clinical studies. Furthermore, assays for measuring gene methylation need to be standardised, simplified and evaluated in external quality assurance programmes. It is concluded that methylated genes have the potential to provide a new generation of cancer biomarkers. </description>
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      <title>Review of the role of the plasminogen activator system and vascular endothelial growth factor in subfertility (Article)</title>
      <link>http://repub.eur.nl/res/pub/14148/</link>
      <pubDate>2008-12-01T00:00:00Z</pubDate>
      <description>Objective: To assess the importance of the plasminogen activator (PA) system and vascular endothelial growth factor (VEGF) in subfertility. Design: Review. Setting: Two university IVF centers. Intervention(s): Systematic literature search (MEDLINE, Science Direct, and bibliographies of published works). Result(s): The PA system in the male is involved in the passage of spermatozoa precursor cells over the blood-testis barrier, the epididymal maturation of spermatozoa, the modifications of the sperm surface for capacitation, the acrosome reaction and zona pellucida attachment, and finally the facilitation of spermatozoa to move into the fallopian tubes. In the female, the PA system plays a role during ovulation in the release of the oocyte from the follicle, the facilitation of oocyte movement into the fallopian tubes, and the extracellular matrix degradation important for angiogenesis in the ovary. The function of VEGF during fertilization is largely unknown. It has been suggested that VEGF is important for the fluid and proteins in semen and fluid secretion in the female genital tract, thereby influencing sperm motility and survival. The latter could be due to an effect of VEGF on testicular microvasculature, through which an adequate microenvironment for spermatogenesis is provided. In the female, VEGF is involved in the regulation of the cyclic ovarian angiogenesis, the development and/or selection of follicles, the accumulation of follicular fluid, and corpus luteum angiogenesis. Conclusion(s): The role of the PA system and VEGF in reproduction most likely is of great interest. However, much of the data are derived from experimental animal studies. So far, information on the importance of these systems in humans is scarcely investigated. Therefore, further research is required to elucidate the role of the PA system and VEGF in the pathogenesis and prevention of male and female subfertility. Eventually, this will contribute to the improvement of the diagnosis of subfertility and may possibly lead to targeted therapeutic management of subfertility.</description>
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      <title>Protein kinase Cδ expression in breast cancer as measured by real-time PCR, western blotting and ELISA (Article)</title>
      <link>http://repub.eur.nl/res/pub/29150/</link>
      <pubDate>2008-11-04T00:00:00Z</pubDate>
      <description>The protein kinase C (PKC) family of genes encode serine/threonine kinases that regulate proliferation, apoptosis, cell survival and migration. Multiple isoforms of PKC have been described, one of which is PKCδ. Currently, it is unclear whether PKCδ is involved in promoting or inhibiting cancer formation/progression. The aim of this study was therefore to investigate the expression of PKCδ in human breast cancer and relate its levels to multiple parameters of tumour progression. Protein kinase Cδ expression at the mRNA level was measured using real-time PCR (n=208) and at protein level by both immunoblotting (n=94) and ELISA (n=98). Following immunoblotting, two proteins were identified, migrating with molecular masses of 78 and 160 kDa. The 78 kDa protein is likely to be the mature form of PKCδ but the identity of the 160 kDa form is unknown. Levels of both these proteins correlated weakly but significantly with PKCδ concentrations determined by ELISA (for the 78 kDa form, r=0.444, P&lt;0.005, n=91 and for the 160 kDa form, r=0.237, P=0.023, n=91) and with PKCδ mRNA levels (for the 78 kDa form, r=0.351, P=0.001, n=94 and for the 160 kDa form, r=0.216, P=0.037, n=94). Protein kinase Cδ mRNA expression was significantly higher in oestrogen receptor (ER)-positive compared with ER-negative tumours (P=0.007, Mann-Whitney U-test). Increasing concentrations of PKCδ mRNA were associated with reduced overall patient survival (P=0.004). Our results are consistent with a role for PKCδ in breast cancer progression. </description>
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      <title>High prevalence of central adrenal insufficiency in patients with Prader-Willi syndrome (Article)</title>
      <link>http://repub.eur.nl/res/pub/28758/</link>
      <pubDate>2008-05-01T00:00:00Z</pubDate>
      <description>Context: The annual death rate of Prader-Willi syndrome (PWS) patients is very high (3%). Many of these deaths are sudden and unexplained. Objective: Because most deaths occur during moderate infections and PWS patients suffer from various hypothalamic insufficiencies, we investigated whether PWS patients suffer from central adrenal insufficiency (CAI) during stressful conditions. Design: Overnight single-dose metyrapone tests were performed. Metyrapone (30 mg/kg) was administered at 2330 h. At 0400, 0600, and 0730 h, ACTH, 11-deoxycortisol, cortisol, and glucose levels were measured. Diurnal salivary cortisol profiles were assessedona different day at wake-up, 30 min after wake-up, at 1400 h, and at 2000 h. Setting: The study was conducted in a pediatric intensive care unit. Patients: Patients included 25 randomly selected PWS patients. Main Outcome Measure: Patients were considered as having CAI when ACTH levels remained below 33 pmol/liter at 0730 h. Results: Median (interquartile range) age was 9.7 (6.8-13.6) yr. Fifteen patients (60%) had an insufficient ACTH response (CAI, P &lt; 0.001). There was no significant difference in age, gender, genotype, and body mass index SD score between patients with CAI and those without. Morning salivary cortisol levels and diurnal profiles were normal in all children, suggesting that CAI becomes apparent only during stressful conditions. Conclusions: Strikingly, 60% of our PWS patients had CAI. The high percentage of CAI in PWS patients might explain the high rate of sudden death in these patients, particularly during infection-related stress. Based on our data, one should consider treatment with hydrocortisone during acute illness in PWS patients unless CAI has recently been ruled out with a metyrapone test. Copyright </description>
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      <title>Complex congenital malformations and the impact of the plasminogen activator system and β-hCG in amniotic fluid (Article)</title>
      <link>http://repub.eur.nl/res/pub/36009/</link>
      <pubDate>2007-11-01T00:00:00Z</pubDate>
      <description>Objective: The plasminogen activator system and β-hCG may affect neural crest cells and angiogenesis, and thereby embryogenesis. Therefore, we investigated these parameters in amniotic fluids of pregnancies with a complex congenital malformation. Study design: In a case-control study amniotic fluid samples were collected from 62 pregnancies with a complex congenital malformation and from 110 healthy control pregnancies at an obstetric department of a large university hospital in the Netherlands. We determined concentrations of tissue-type plasminogen activator (tPA), urokinase-type plasminogen activator (uPA), plasminogen activator inhibitors (PAI-1, PAI-2), tPA∼PAI-1 and uPA∼PAI-1 complexes, and β-hCG with enzyme-linked immunosorbent assays. Mann-Whitney U-tests and analysis of covariance, adjusting for gestational and maternal age, were performed for data comparisons. Results: Compared with controls, cases demonstrated significantly lower adjusted geometric mean levels of uPA (24%), tPA (≥19%) and tPA∼PAI-1 (35%). Cases showed significantly higher adjusted mean levels of β-hCG (≥48%) and PAI-2 (10 ng/mL) than controls. Mean PAI-1 and uPA∼PAI-1 levels were comparable between both groups. Conclusions: Disturbances in the plasminogen activator system and β-hCG levels are suggested to be involved in the pathogenesis of complex congenital malformations by affecting neural crest cell migration and angiogenesis. </description>
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      <title>Biomarkers for therapeutic efficacy (Article)</title>
      <link>http://repub.eur.nl/res/pub/36772/</link>
      <pubDate>2007-09-01T00:00:00Z</pubDate>
      <description>Depending on the tumour type, a larger or smaller number of cancer patients receive chemotherapy with systemic toxicity as the only effect. In that situation, an alternative, not necessarily medical, treatment would have been a better choice - and toxicity (and financial resources) could have been spared by withholding ineffective drugs. One of the reasons for this apparent paradigm is that the tumour cells of each cancer pa- tient may show different sensitivity/resistance towards different chemotherapeutic drugs, i.e. breast cancer or colorectal cancer is not only breast or colorectal cancer. With our increasing biological insight and understanding, it has become apparent that each patient's tumour tissue is unique and as a consequence, each patient's tumour cell sensitivity/resistance to- wards chemotherapeutic drugs may be different. As of today there is no method in routine clinical use to predict the sensitivity/resistance to chemotherapy in its broad sense in the individual patient. This chapter will describe several different DNA, RNA, protein and cell based assay methodologies and marker molecules that have been brought forward as potential predictive assays/markers to be used to select the most effective drugs for the individual cancer patient. </description>
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      <title>Association between high levels of blood macrophage migration inhibitory factor, inappropriate adrenal response, and early death in patients with severe sepsis (Article)</title>
      <link>http://repub.eur.nl/res/pub/36644/</link>
      <pubDate>2007-05-15T00:00:00Z</pubDate>
      <description>Background. Identification of new therapeutic targets remains an imperative goal to improve the morbidity and mortality associated with severe sepsis and septic shock. Macrophage migration inhibitory factor (MIF), a proinflammatory cytokine and counterregulator of glucocorticoids, has recently emerged as a critical mediator of innate immunity and experimental sepsis, and it is an attractive new target for the treatment of sepsis. Methods. Circulating concentrations of MIF were measured in 2 clinical trial cohorts of 145 pediatric and adult patients who had severe sepsis or septic shock caused predominantly by infection with Neisseria meningitidis or other gram-negative bacteria, to study the kinetics of MIF during sepsis, to analyze the interplay between MIF and other mediators of sepsis or stress hormones (adrenocorticotropic hormone and cortisol), and to determine whether MIF is associated with patient outcome. Results. Circulating concentrations of MIF were markedly elevated in 96% of children and adults who had severe sepsis or septic shock, and they remained elevated for several days. MIF levels were correlated with sepsis severity scores, presence of shock, disseminated intravascular coagulation, urine output, blood pH, and lactate and cytokine levels. High levels of MIF were associated with a rapidly fatal outcome. Moreover, in meningococcal sepsis, concentrations of MIF were positively correlated with adrenocorticotropic hormone levels and negatively correlated with cortisol levels and the cortisol: adrenocorticotropic hormone ratio, suggesting an inappropriate adrenal response to sepsis. Conclusions. MIF is markedly and persistently up-regulated in children and adults with gram-negative sepsis and is associated with parameters of disease severity, with dysregulated pituitary-adrenal function in meningococcal sepsis, and with early death. </description>
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      <title>Possible role of the plasminogen activation system in human subfertility (Article)</title>
      <link>http://repub.eur.nl/res/pub/35542/</link>
      <pubDate>2007-03-01T00:00:00Z</pubDate>
      <description>Objective: To correlate components of the plasminogen activator (PA) system with fertility outcome parameters in participants in an IVF/intracytoplasmic sperm injection (ICSI) procedure. Design: Case-control study. Setting: Outpatient clinic for IVF/ICSI treatment at the Radboud University Nijmegen Medical Center, Nijmegen, The Netherlands. Patient(s): One hundred and fifty-six couples undergoing an IVF/ICSI procedure. Intervention(s): None. Main Outcome Measure(s): Urokinase-type plasminogen activator (u-PA), tissue-type plasminogen activator (t-PA), plasminogen activator inhibitor 1 (PAI-1), and t-PA-PAI-1 complex concentrations in the ejaculate, spermatozoa, and follicular fluid (FF). Result(s): Concentrations of t-PA were higher in spermatozoa of the male factor subfertility group (geometrical mean, 77.1 pg/million spermatozoa; 25th-75th percentiles, 31.8-211.2), compared to fertile men (geometrical mean, 1.91; 25th-75th percentiles, 0.74-5.79) and idiopathic subfertile men (geometrical mean, 3.14; 25th-75th percentiles, 0.97-9.97). Furthermore, the concentration of t-PA in spermatozoa was significantly associated with pregnancy (odds ratio [OR], 0.995). Likewise, a trend was shown for higher t-PA concentrations in the FF of women with fallopian-tube pathology (geometrical mean, 18.5 pg t-PA/mg protein; 25th-75th percentiles, 11.4-25.7) or endometriosis (geometrical mean, 18.8; 25th-75th percentiles, 11.4-27.1), compared to fertile women (geometrical mean, 14.3; 25th-75th percentiles, 10.3-17.6) and idiopathic subfertile women (geometrical mean, 13.9; 25th-75th percentiles, 9.5-17.8). Also, t-PA in FF is associated with the proportion of cleaved embryos (regression coefficient, 0.16). The concentrations of u-PA, PAI-1, and t-PA-PAI-1 complex were comparable between diagnostic subgroups in both men and women. Conclusion(s): The t-PA concentrations in spermatozoa and FF tend to be higher in human subfertility, and seem to be associated with some fertility outcome parameters. </description>
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      <title>European Organisation for Research and Treatment of Cancer (EORTC) Pathobiology Group standard operating procedure for the preparation of human tumour tissue extracts suited for the quantitative analysis of tissue-associated biomarkers (Article)</title>
      <link>http://repub.eur.nl/res/pub/36496/</link>
      <pubDate>2007-03-01T00:00:00Z</pubDate>
      <description>With the new concept of 'individualized treatment and targeted therapies', tumour tissue-associated biomarkers have been given a new role in selection of cancer patients for treatment and in cancer patient management. Tumour biomarkers can give support to cancer patient stratification and risk assessment, treatment response identification, or to identifying those patients who are expected to respond to certain anticancer drugs. As the field of tumour-associated biomarkers has expanded rapidly over the last years, it has become increasingly apparent that a strong need exists to establish guidelines on how to easily disintegrate the tumour tissue for assessment of the presence of tumour tissue-associated biomarkers. Several mechanical tissue (cell) disruption techniques exist, ranging from bead mill homogenisation and freeze-fracturing through to blade or pestle-type homogenisation, to grinding and ultrasonics. Still, only a few directives have been given on how fresh-frozen tumour tissues should be processed for the extraction and determination of tumour biomarkers. The PathoBiology Group of the European Organisation for Research and Treatment of Cancer therefore has devised a standard operating procedure for the standardised preparation of human tumour tissue extracts which is designed for the quantitative analysis of tumour tissue-associated biomarkers. The easy to follow technical steps involved require 50-300 mg of deep-frozen cancer tissue placed into small size (1.2 ml) cryogenic tubes. These are placed into the shaking flask of a Mikro-Dismembrator S machine (bead mill) to pulverise the tumour tissue in the capped tubes in the deep-frozen state by use of a stainless steel ball, all within 30 s of exposure. RNA is isolated from the pulverised tissue following standard procedures. Proteins are extracted from the still frozen pulverised tissue by addition of Tris-buffered saline to obtain the cytosol fraction of the tumour or by the Tris buffer supplemented with the non-ionic detergent Triton X-100, and, after high-speed centrifugation, are found in the tissue supernatant. The resulting tissue cell debris sediment is a rich source of genomic DNA. </description>
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      <title>The prognostic value of BCAR1 in patients with primary breast cancer. (Article)</title>
      <link>http://repub.eur.nl/res/pub/13506/</link>
      <pubDate>2004-09-15T00:00:00Z</pubDate>
      <description>PURPOSE: BCAR1, the human homologue of the rat p130Cas protein, was
      identified in a functional screen for human breast cancer cell
      proliferation resistant to antiestrogen drugs. Here, we study the
      prognostic value of quantitative BCAR1 levels in a large series of breast
      cancer specimens. EXPERIMENTAL DESIGN: A specific ELISA was developed to
      measure BCAR1 protein levels in 2593 primary breast tumor cytosols. Tumor
      levels of BCAR1 were correlated with relapse-free survival (RFS) and
      overall survival (OS) and compared with collected data on urokinase-type
      plasminogen activator (uPA) and plasminogen activator inhibitor 1 (PAI-1).
      RESULTS: In tumor cytosols, BCAR1 protein levels varied between 0.02 and
      23 ng/mg protein. BCAR1 levels exhibited a positive correlation with
      steroid hormone receptor levels, age and menopausal status, and uPA and
      PAI-1 levels. The level of BCAR1 (continuous or categorized as low,
      intermediate, or high) was inversely related with RFS and OS time.
      Multivariate analysis showed that BCAR1 levels contributed independently
      to a base model containing the traditional prognostic factors for both RFS
      and OS (both P &lt; 0.0001). When added together with uPA and PAI-1 in the
      multivariate model, BCAR1 contributed independently of PAI-1 and was
      favored over uPA. Interaction tests allowed for additional analyses of
      BCAR1 protein levels in clinically relevant subgroups stratified by nodal
      and menopausal status. CONCLUSIONS: The quantitative BCAR1 protein level
      represents a prognostic factor for RFS and OS in primary breast cancer,
      independent of the traditional prognostic factors and the other novel
      marker PAI-1.</description>
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      <title>Combined vascular endothelial growth factor and TP53 status predicts poor response to tamoxifen therapy in estrogen receptor-positive advanced breast cancer (Article)</title>
      <link>http://repub.eur.nl/res/pub/10121/</link>
      <pubDate>2003-01-01T00:00:00Z</pubDate>
      <description>PURPOSE: In recent studies, we showed that TP53 gene mutation or high
      levels of cytosolic vascular endothelial growth factor (VEGF) in estrogen
      receptor (ER)-alpha-positive primary breast tumors predict a poor disease
      outcome for patients treated with first-line tamoxifen for advanced
      disease. Mutant TP53 may up-regulate VEGF, whereas, on the other hand,
      wild-type TP53 may decrease VEGF production. EXPERIMENTAL DESIGN: In the
      present study, we aimed to assess the combined predictive value of TP53
      gene mutation and VEGF status of 160 advanced breast cancer patients with
      ER-positive tumors who were treated with tamoxifen (median follow-up from
      start of tamoxifen treatment, 64 months). To assess TP53 gene mutation
      status, the entire open reading frame was sequenced; for VEGF status, an
      ELISA was used. RESULTS: In univariate analysis, both TP53 gene mutation
      (28% of the tumors) and a VEGF level above the median value were
      significantly associated with a short progression-free survival,
      post-relapse overall survival, and a poor rate of response to tamoxifen.
      In Cox multivariate regression analysis including the traditional
      predictive factors, the addition of TP53 gene mutation and VEGF status,
      alone or in combination, significantly predicted a poor efficacy of
      tamoxifen treatment. When the two factors were combined, a significantly
      decreased odds ratio was seen for the rate of response (odds ratio, 0.27).
      Similarly, an increased hazard ratio (HR) was seen for progression-free
      survival (HR, 2.32) and post-relapse overall survival (HR, 1.68) in the
      group with mutant TP53 and high VEGF compared with the group with both
      risk factors absent. CONCLUSIONS: Combined TP53 gene mutation status and
      high VEGF levels of ER-positive primary breast tumors independently
      predict a poor course of the disease of patients with advanced breast
      cancer treated with tamoxifen. These patients, having unfavorable tumor
      characteristics, might benefit more from other types of (individualized)
      treatment protocols.</description>
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