Hout, M.C.G.N. van den

narwhal sample sequencing analysis alignment pipeline sequence application format de-multiplexing genome fastq number casava sample-sheet sequencing data aligner assessment erasmus universiteit rotterdam open-source aligners fastq fi quality software narwhal software pipeline quality assessment illumina bioinformatic setting process barcode reference center figuration reference genome error netherland fl exibility ef ficient dna sequences illumina sequencers processing bowtie output fi dna fragments result open-source ef ficiently location analysis software oxford university press parameter samtool netherlands 2 netherlands vivo protein-dna interactions information gnu time tool custom c tool prede fined alignment netherlands bioinformatics center casava v 1.7 illumina sequencing data input 4 quad-core cpus speci erasmu introduction illumina qseq fi input fastq fi table sequencer ficient figuration narwhal processes illumina basecalls folder comparison netherlands genomics initiative speci fic sample open-source alignment tools custom c ++ exible memory-ef ficient alignment