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    <title>Tümkaya, T.</title>
    <link>http://repub.eur.nl/res/aut/5590/</link>
    <description>List of Publications</description>
    <language>en</language>
    <image>
      <url>http://repub.eur.nl/static-eur/img/logo.png</url>
      <title>RePub, Erasmus University Rotterdam</title>
      <link>http://repub.eur.nl</link>
    </image>
    <item>
      <title>Unraveling of the polymorphic C lambda 2-C lambda 3 amplification and the Ke+Oz- polymorphism in the human Ig lambda locus (Article)</title>
      <link>http://repub.eur.nl/res/pub/9926/</link>
      <pubDate>2002-01-01T00:00:00Z</pubDate>
      <description>Two polymorphisms of the human Ig(lambda) (IGL) locus have been described.
      The first polymorphism concerns a single, 2- or 3-fold amplification of
      5.4 kb of DNA in the C(lambda)2-C(lambda)3 region. The second polymorphism
      is the Mcg(-)Ke(+)Oz(-) isotype, which has only been defined via
      serological analyses in Bence-Jones proteins of multiple myeloma patients
      and was assumed to be encoded by a polymorphic C(lambda)2 segment because
      of its high homology with the Mcg(-)Ke(-)Oz(-) C(lambda)2 isotype. It has
      been speculated that the Mcg(-)Ke(+)Oz(-) isotype might be encoded by a
      C(lambda) gene segment of the amplified C(lambda)2-C(lambda)3 region. We
      now unraveled both IGL gene polymorphisms. The amplification polymorphism
      appeared to result from a duplication, triplication, or quadruplication of
      a functional J-C(lambda)2 region and is likely to have originated from
      unequal crossing over of the J-C(lambda)2 and J-C(lambda)3 region via a
      2.2-kb homologous repeat. The amplification polymorphism was found to
      result in the presence of one to five extra functional J-C(lambda)2 per
      genome regions, leading to decreased Ig(kappa):Ig(lambda) ratios on normal
      peripheral blood B cells. Via sequence analysis, we demonstrated that the
      Mcg(-)Ke(+)Oz(-) isotype is encoded by a polymorphic C(lambda)2 segment
      that differs from the normal C(lambda)2 gene segment at a single
      nucleotide position. This polymorphism was identified in only 1.5% (2 of
      134) of individuals without J-C(lambda)2 amplification polymorphism and
      was not found in the J-C(lambda)2 amplification polymorphism of 44
      individuals, indicating that the two IGL gene polymorphisms are not
      linked.</description>
    </item> <item>
      <title>Ordered recombination of immunoglobulin light chain genes occurs at the IGK locus but seems less strict at the IGL locus (Article)</title>
      <link>http://repub.eur.nl/res/pub/9583/</link>
      <pubDate>2001-01-01T00:00:00Z</pubDate>
      <description>Regulation of allelic and isotypic exclusion of human immunoglobulin (Ig)
      light-chain genes was studied in 113 chronic B-cell leukemias as a
      "single-cell" model that allowed complete analysis of each light chain
      allele. Our data show that monospecific Ig light chain expression is in
      about 90% of cases determined by ordered recombination: Igkappa gene (IGK)
      rearrangements, followed by IGK deletions and Iglambda gene (IGL)
      rearrangements, resulting in the presence of only one functional Ig light
      chain rearrangement. In about 10% (10 cases), 2 functional Ig light chain
      rearrangements (IGK/IGL or IGL/IGL, but not IGK/IGK) were identified. This
      might be explained by the fact that regulation of the ordered
      recombination process is not fully strict, particularly when the IGL locus
      is involved. Unfavorable somatic mutations followed by receptor editing
      might have contributed to this finding. Eight of these 10 cases indeed
      contained somatic mutations. In cases with 2 functional Ig light chain
      rearrangements, both alleles were transcribed, but monospecific Ig
      expression was still maintained. This suggests that in these cases
      allelelic exclusion is not regulated at the messenger RNA level but either
      at the level of translation or protein stability or via preferential
      pairing of Ig light and Ig heavy chains. Nevertheless, ordered
      rearrangement processes are the main determinant for monospecific Ig light
      chain expression.</description>
    </item> <item>
      <title>Immunoglobulin lambda light chain gene rearrangements in human B-cell malignancies (Doctoral Thesis)</title>
      <link>http://repub.eur.nl/res/pub/18185/</link>
      <pubDate>1997-06-26T00:00:00Z</pubDate>
      <description>Lymphocytes form the specific immune system, capable of recognizing and
responding to any foreign antigen, while remaining indifferent to self components.
Throughout human life, lymphocytes are continuously generated from pluripotent
hematopoietic stem cells. These hematopoietic stem cells are already detectable in
the yolk sac and in the fetal liver from the second month of gestation onwards.
After birth, the hematopoietic stem cells are mainly found in the bone marrow (BM).
Two types of lymphocytes exist: B-lymphocytes and T-lymphocytes. Progenitor Bcells
differentiate into mature B-lymphocytes in the BM, while progenitor T-cells
differentiate into mature T-lymphocytes in the thymus. Mature B- and T-lymphocytes
recognize foreign antigens via smface receptor molecules, the so-called antigen specific
receptors. The antigen specific receptors of B-and T-lymphocytes are called B-cell
receptor (BCR) or immunoglobulin (Ig) molecules and T-cell receptor (TCR) molecules,
respectively.
Differentiation of progenitor B-cells into mature B-lymphocytes is regulated via
interaction with stromal cells in the BM. In the earliest stages, progenitor B-cells
must be in direct contact with the stromal cells, and fmiher differentiation is
dependent on growth factors, such as cytokines and hematopoietic growth factors, which
are secreted by the stroma. These growth factors and cytokines induce
proliferation, differentiation, and maturation in an organized way.</description>
    </item>
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