Effect of polymorphisms in folate-related genes on in vitro methotrexate sensitivity in pediatric acute lymphoblastic leukemia
January 2005
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We studied whether common polymorphisms in genes involved in folate metabolism affect methotrexate (MTX) sensitivity. Ex vivo MTX sensitivity of lymphoblasts obtained from pediatric patients with acute lymphoblastic leukemia (ALL; n = 157) was determined by the in situ thymidylate synthase inhibition assay after either continuous (21 hours; TSI(50, cont)) or short-term (3 hours; TSI(50, short)) MTX exposure. DNA was isolated from lymphoblasts obtained from cytospin slides. Polymorphisms in methylenetetrahydrofolate reductase (MTHFR 677C>T, MTHFR 1298A>C), methionine synthase (MTR 2756A>G), methionine synthase reductase (MTRR 66A>G), methylenetetrahydrofolate dehydrogenase (MTHFD1 1958G>A), serine hydroxymethyl transferase (SHMT1 1420C>T), thymidylate synthase (TS 2R3R), and the reduced folate carrier (RFC 80G>A) were detected by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) or real-time PCR. Patients with the MTHFR 1298AC variant or the MTRR 66 G-allele showed decreased in vitro MTX sensitivity measured under both test conditions. SHMT1 1420TT homozygotes only showed decreased MTX sensitivity in the TSI(50, cont). In conclusion, polymorphisms in the folate-related genes MTHFR, MTRR, and SHMT1 are related to MTX resistance in pediatric patients with ALL.
- Child
- In Vitro
- Humans
- Drug Resistance, Neoplasm/genetics
- Variation (Genetics)
- *Polymorphism, Genetic
- Antimetabolites, Antineoplastic/*pharmacology
- Ferredoxin-NADP Reductase/genetics
- Folic Acid/*genetics/metabolism
- Glycine Hydroxymethyltransferase/genetics
- Leukemia, Lymphocytic, Acute/*drug therapy/*genetics/metabolism
- Methotrexate/*pharmacology
- Methylenetetrahydrofolate Reductase (NADPH2)/genetics
- polymorphism
- mthfr
- patient
- folate
- sensitivity
- mtx sensitivity
- reductase
- synthase
- methotrexate
- blood
- thymidylate
- thymidylate synthase
- mthfr 1298 ac
- leukemia
- analysis
- mtrr 66
- methylenetetrahydrofolate reductase
- folate-related genes
- folate carrier
- effect